RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 ZNF628Q5EBL2 1059 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IDNKQ5T6J7 187 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 OVCH1Q7RTY7 1134 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 LINC00518Q8N0U6 118 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 FRMD1Q8N878 549 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 RCBTB1Q8NDN9 531 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CSF3RQ99062 836 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 NEURL2Q9BR09 285 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IKZF5Q9H5V7 419 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 B3GNT2Q9NY97 397 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 GMPR2Q9P2T1 348 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 WIF1Q9Y5W5 379 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CEPT1Q9Y6K0 416 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 VWA8A3KMH1 1905 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 FAM240BA0A1B0GVZ2 78 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 E9PI62 339 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ZNF208O43345 1280 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IFNA6P05013 189 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CHRM4P08173 479 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CRHBPP24387 322 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 NAA10P41227 235 aaPredicted RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 CSNK1A1P48729 337 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 MLLT10P55197 1068 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SNRPGP62308 76 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 TGFBR3Q03167 851 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 C19orf57Q0VDD7 668 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 OR7A5Q15622 319 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SGCAQ16586 387 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 DUSP7Q16829 419 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 VWA2Q5GFL6 755 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 NHSL2Q5HYW2 709 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ATAD3CQ5T2N8 411 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SSX6Q7RTT6 188 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CADM3Q8N126 398 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 IQCF1Q8N6M8 205 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 OR1L3Q8NH93 324 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CNOT9Q92600 299 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 TSLPQ969D9 159 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ZNF566Q969W8 418 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 INTS14Q96SY0 518 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 TWSG1Q9GZX9 223 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 CDC14CA4D256 554 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 D6RAR5 112 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 LRRTM2O43300 516 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ORC5O43913 435 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 KIAA0513O60268 411 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 GPRIN2O60269 458 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SLC19A2O60779 497 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 DDAH2O95865 285 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 PIGAP37287 484 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SLC35D3Q5M8T2 416 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 PGBD2Q6P3X8 592 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ZNF454Q8N9F8 522 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 SNIP1Q8TAD8 396 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 TMED9Q9BVK6 235 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 RANBP3Q9H6Z4 567 aaPredicted RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 TMEM138Q9NPI0 162 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 ACER3Q9NUN7 267 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 GPR83Q9NYM4 423 aa6.95□□□□□ -1.3
TCF4-216ENST00000562680 KLF13Q9Y2Y9 288 aaPredicted RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 URB1O60287 2271 aaKnown RBP6.95□□□□□ -1.3
TCF4-216ENST00000562680 RRP8O43159 456 aaKnown RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 TXNL1O43396 289 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RGS9O75916 674 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 CDRT1O95170 752 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 HOXC5Q00444 222 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SLC14A1Q13336 389 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NXNL2Q5VZ03 156 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 LHFPL3Q86UP9 236 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SPNS2Q8IVW8 549 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SLC35F2Q8IXU6 374 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NLGN4XQ8N0W4 816 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF561Q8N587 486 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 PLPP5Q8NEB5 264 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NLGN4YQ8NFZ3 816 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 NEK7Q8TDX7 302 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 A0A1W2PR77 199 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 C7orf72A4D263 438 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ASPDHA6ND91 283 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 KRBOX1C9JBD0 128 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 H3BML4 177 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 GASTP01350 101 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SFTPDP35247 375 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 RNF144AP50876 292 aaPredicted RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 PCBD1P61457 104 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 BTG2P78543 158 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF91Q05481 1191 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 FGL1Q08830 312 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 UBQLNLQ8IYU4 475 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 CLDN22Q8N7P3 220 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 ZNF321PQ8N8H1 164 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 NEIL3Q8TAT5 605 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 GABARAPL3Q9BY60 117 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 CHST8Q9H2A9 424 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SLC38A1Q9H2H9 487 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 UGT2A1Q9Y4X1 527 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 LINC01387J3KSC0 135 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 J3KTA2 159 aa6.94□□□□□ -1.3
TCF4-216ENST00000562680 SMAD9O15198 467 aaKnown RBP6.94□□□□□ -1.3
TCF4-216ENST00000562680 GP1BAP07359 652 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms