RNA–Protein interactions for RNA: ENST00000561348.1

HERC1-212, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-212ENST00000561348 THY1P04216 161 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 IFNW1P05000 195 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 THBDP07204 575 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PPP3CBP16298 524 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PSMB1P20618 241 aaKnown RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 HOXC12P31275 282 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 SELENOPP49908 381 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 SLC16A1P53985 500 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 FOXG1P55316 489 aaPredicted RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 POU3F1Q03052 451 aaPredicted RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 KEAP1Q14145 624 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 DAZAP2Q15038 168 aaPredicted RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 P2RY6Q15077 328 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PDK3Q15120 406 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 IFI44LQ53G44 452 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 C5orf46Q6UWT4 87 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 C6orf89Q6UWU4 347 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 C16orf89Q6UX73 402 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 WDR88Q6ZMY6 472 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 CREB3L2Q70SY1 520 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 TSPYL5Q86VY4 417 aaPredicted RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 MEX3DQ86XN8 651 aaKnown RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 NKAIN4Q8IVV8 208 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 FITM2Q8N6M3 262 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 LRRC17Q8N6Y2 441 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PFN4Q8NHR9 129 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 BCAS4Q8TDM0 211 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 TMEM255BQ8WV15 326 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PLPPR2Q96GM1 343 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 NSL1Q96IY1 281 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 HSH2DQ96JZ2 352 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 OXGR1Q96P68 337 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 ALKBH3Q96Q83 286 aaPredicted RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 EMC6Q9BV81 110 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 FNDC11Q9BVV2 318 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 SF3B5Q9BWJ5 86 aaKnown RBP8.94□□□□□ -0.98
HERC1-212ENST00000561348 NANSQ9NR45 359 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 PRDM4Q9UKN5 801 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 SNX13Q9Y5W8 968 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 CREBBPQ92793 2442 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 POLQO75417 2590 aa8.94□□□□□ -0.98
HERC1-212ENST00000561348 AKAP6Q13023 2319 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 TEX15Q9BXT5 2789 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 APCP25054 2843 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.93□□□□□ -0.98
HERC1-212ENST00000561348 ZNF726A6NNF4 738 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 ENO4A6NNW6 628 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 FTCDNL1E5RQL4 147 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 hCG_2039718K7EN88 272 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 BGLAPP02818 100 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 HRGP04196 525 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 CRYGSP22914 178 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 DNASE1P24855 282 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 ZNF83P51522 516 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 LTBQ06643 244 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 MFSD13AQ14CX5 517 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 PPA1Q15181 289 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 TAB1Q15750 504 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 SWT1Q5T5J6 900 aaKnown RBP8.93□□□□□ -0.98
HERC1-212ENST00000561348 HMBOX1Q6NT76 420 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 KLHL24Q6TFL4 600 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 RRM2BQ7LG56 351 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 NANOGNBQ7Z5D8 188 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 EPHX4Q8IUS5 362 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 PGAM4Q8N0Y7 254 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 GPR137CQ8N3F9 429 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 ZNF433Q8N7K0 673 aaPredicted RBP8.93□□□□□ -0.98
HERC1-212ENST00000561348 ZIC4Q8N9L1 334 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 TMEM43Q9BTV4 400 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 AMBRA1Q9C0C7 1298 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 PCDHAC1Q9H158 963 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 SLCO5A1Q9H2Y9 848 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 NGBQ9NPG2 151 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 CCM2LQ9NUG4 571 aaPredicted RBP8.93□□□□□ -0.98
HERC1-212ENST00000561348 MED29Q9NX70 200 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 TAS2R16Q9NYV7 291 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 RPS6KA6Q9UK32 745 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 EDARQ9UNE0 448 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 B3GALT5Q9Y2C3 310 aa8.93□□□□□ -0.98
HERC1-212ENST00000561348 FAM32AQ9Y421 112 aaKnown RBP8.93□□□□□ -0.98
HERC1-212ENST00000561348 A0A096LPE4 126 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 A0A1W2PPZ6 126 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 DEFB108AA8MXU0 73 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 ZNF587BE7ETH6 402 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 MS4A18H0YCH9 400 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 M0R1B8 84 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 M0R3G1 203 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 SIAH2O43255 324 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 AKAP8O43823 692 aaKnown RBP8.92□□□□□ -0.98
HERC1-212ENST00000561348 PIP5K1CO60331 668 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 SLC43A1O75387 559 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 UPK3AO75631 287 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 SEC14L2O76054 403 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 DIRAS1O95057 198 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 OR5F1O95221 314 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 HPRP00739 348 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 PLAUP00749 431 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 IFI30P13284 250 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 HLA-DOBP13765 273 aa8.92□□□□□ -0.98
HERC1-212ENST00000561348 FUT1P19526 365 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms