RNA–Protein interactions for RNA: ENST00000560637.5

VPS13C-209, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

TSL 1 (best)

Gene VPS13C, Length 3,684 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-209ENST00000560637 SMIM10Q96HG1 83 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 MOGAT1Q96PD6 335 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 SIGLEC12Q96PQ1 595 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 EMC7Q9NPA0 242 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 B3GAT2Q9NPZ5 323 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 SIRT5Q9NXA8 310 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF337Q9Y3M9 751 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PCDHGB2Q9Y5G2 931 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 MYLKQ15746 1914 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 TMEM72A0PK05 275 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 A6NLC8 198 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 GJE1A6NN92 205 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 J3QRK9 145 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 CHP2O43745 196 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF354AO60765 605 aaPredicted RBP4.94□□□□□ -1.62
VPS13C-209ENST00000560637 CELA3AP09093 270 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ANKRD34CP0C6C1 535 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 COX6A1P12074 109 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 BMP2P12643 396 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 UQCRC1P31930 480 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 CDAP32320 146 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 GGT2P36268 569 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ZFP36L2P47974 494 aaKnown RBP4.94□□□□□ -1.62
VPS13C-209ENST00000560637 CLDN20P56880 219 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 FMODQ06828 376 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 SCN1BQ07699 218 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PUDPQ08623 228 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 MYBPHQ13203 477 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 TMED1Q13445 227 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PCOLCEQ15113 449 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ACKR1Q16570 336 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ANKDD1AQ495B1 522 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ARMCX4Q5H9R4 360 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ALDH16A1Q8IZ83 802 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 OR8H2Q8N162 312 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 METTL25Q8N6Q8 603 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 OR52N5Q8NH56 324 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 SGCDQ92629 289 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PPP1R14AQ96A00 147 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PNPLA2Q96AD5 504 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 OSBPL10Q9BXB5 764 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PLA2G12AQ9BZM1 189 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 ENKD1Q9H0I2 346 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 OLAHQ9NV23 265 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 DNAJB12Q9NXW2 375 aaKnown RBP4.94□□□□□ -1.62
VPS13C-209ENST00000560637 PDP2Q9P2J9 529 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 DUSP13Q9UII6 198 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 CDH10Q9Y6N8 788 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 LRRK2Q5S007 2527 aa4.94□□□□□ -1.62
VPS13C-209ENST00000560637 TRAV36DV7A0A075B6V5 113 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 A0A0G2JMM0 328 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 A0A1W2PPB8 328 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 A0A1W2PRS3 328 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 OR6C70A6NIJ9 312 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 PRR19A6NJB7 356 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CD8B2A6NJW9 211 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 KIR3DP1A8MWS1 328 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 KIAA0513O60268 411 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 RAD51DO75771 328 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CBR3O75828 277 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 HPP00738 406 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 OR8G3PP0DMU2 310 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CD8BP10966 210 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CD36P16671 472 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CSRP1P21291 193 aaKnown RBP4.93□□□□□ -1.62
VPS13C-209ENST00000560637 GALNSP34059 522 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CD97P48960 835 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 RBPJQ06330 500 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 RPL18Q07020 188 aaKnown RBP4.93□□□□□ -1.62
VPS13C-209ENST00000560637 PGGHGQ32M88 737 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 PLA2G2CQ5R387 149 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 OGFRL1Q5TC84 451 aaPredicted RBP4.93□□□□□ -1.62
VPS13C-209ENST00000560637 HEPHL1Q6MZM0 1159 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 ARHGAP11AQ6P4F7 1023 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 RPTNQ6XPR3 784 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF813Q6ZN06 617 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 MBOAT2Q6ZWT7 520 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 CAMKMTQ7Z624 323 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 SULF2Q8IWU5 870 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF615Q8N8J6 731 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 APCDD1LQ8NCL9 501 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 BBS1Q8NFJ9 593 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 OR2T4Q8NH00 348 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 THAP4Q8WY91 577 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 POP5Q969H6 163 aaKnown RBP4.93□□□□□ -1.62
VPS13C-209ENST00000560637 ZNF566Q969W8 418 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 C3orf49Q96BT1 292 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 MS4A3Q96HJ5 214 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 KLHL15Q96M94 604 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 MROQ9BYG7 248 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 SLITRK2Q9H156 845 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 UBQLN3Q9H347 655 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 HHATLQ9HCP6 504 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 TMEM45AQ9NWC5 275 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 KCNE5Q9UJ90 142 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 SSR3Q9UNL2 185 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 GSTK1Q9Y2Q3 226 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 A0A1B0GTH9 108 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 ANKRD61A6NGH8 418 aa4.93□□□□□ -1.62
VPS13C-209ENST00000560637 OR6C76A6NM76 312 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms