RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 SGCEO43556 437 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 DNAJB6O75190 326 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF821O75541 412 aaPredicted RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 POP7O75817 140 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 KLHL18O94889 574 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 CLDN7O95471 211 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 VNN2O95498 520 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PRAMEF12O95522 483 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ACAA1P09110 424 aaPredicted RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 FBP1P09467 338 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 CSF1P09603 554 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 GKN3PP0CG01 181 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PRF1P14222 555 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ATF1P18846 271 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 HOXA5P20719 270 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ACADLP28330 430 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 IMPA1P29218 277 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SERPINA4P29622 427 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 DGKEP52429 567 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ART1P52961 327 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 HCCSP53701 268 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 OR10A3P58181 314 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 TAS2R41P59536 307 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 RAB8AP61006 207 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PPIAP62937 165 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 IL13RA1P78552 427 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 TAF10Q12962 218 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 NAE1Q13564 534 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SNTB1Q13884 538 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 GRB14Q14449 540 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 IRF4Q15306 451 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 TAF12Q16514 161 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC25A35Q3KQZ1 300 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 LINC00303Q3SY05 128 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 Q3ZCU0 254 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ACSM3Q53FZ2 586 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 DNLZQ5SXM8 178 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 FAM199XQ6PEV8 388 aaPredicted RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ARL9Q6T311 187 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 APOOLQ6UXV4 268 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF813Q6ZN06 617 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 MBOAT2Q6ZWT7 520 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ABHD13Q7L211 337 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 OTOP2Q7RTS6 562 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 C6orf120Q7Z4R8 191 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 LDLRAD3Q86YD5 345 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 RBM45Q8IUH3 476 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PUSL1Q8N0Z8 303 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 CFAP52Q8N1V2 620 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SIRT6Q8N6T7 355 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 C15orf54Q8N8G6 183 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 KLHDC9Q8NEP7 349 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 GPRC5AQ8NFJ5 357 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 OR6T1Q8NGN1 323 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 OR6N1Q8NGY5 312 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 STOML3Q8TAV4 291 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 RPS4Y2Q8TD47 263 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 THAP4Q8WY91 577 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 MRPS31Q92665 395 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ARL11Q969Q4 196 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM41AQ96HV5 264 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ZFP3Q96NJ6 502 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 FCRL4Q96PJ5 515 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 TIMP4Q99727 224 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PAAF1Q9BRP4 392 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 GINS4Q9BRT9 223 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SGPP1Q9BX95 441 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 FXYD6Q9H0Q3 95 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ATG10Q9H0Y0 220 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 AUNIPQ9H7T9 357 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 NRIP3Q9NQ35 241 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 HINT3Q9NQE9 182 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 STARD7Q9NQZ5 370 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 GSN-AS1Q9NRJ2 163 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 SIRT3Q9NTG7 399 aaPredicted RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 UPB1Q9UBR1 384 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ZNF629Q9UEG4 869 aaPredicted RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ST6GALNAC2Q9UJ37 374 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 MRTO4Q9UKD2 239 aaKnown RBP5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ADAM29Q9UKF5 820 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 ERVK-19Q9WJR5 959 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 PLEKHM1Q9Y4G2 1056 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 OR51B4Q9Y5P0 310 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 COL4A6Q14031 1691 aa5.46□□□□□ -1.54
SNRPA1-209ENST00000560307 CKAP5Q14008 2032 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC5A10A0PJK1 596 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 PMS2P1A4D2B8 440 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 C5orf52A6NGY3 159 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 TMEM200CA6NKL6 621 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 SLC38A8A6NNN8 435 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 C2orf74A8MZ97 194 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 BLOC1S5-TXNDC5H3BN57 136 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 M0R3H8 397 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 SOCS6O14544 535 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 NPC1O15118 1278 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 SCAMP1O15126 338 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 TSPAN3O60637 253 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 EIF3GO75821 320 aaKnown RBP eCLIP5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 PMS2P2O95744 297 aa5.45□□□□□ -1.54
SNRPA1-209ENST00000560307 TBX18O95935 607 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms