RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 SLC35D3Q5M8T2 416 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 C22orf42Q6IC83 251 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 DESI1Q6ICB0 168 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 TMEM205Q6UW68 189 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 B3GLCTQ6Y288 498 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 GPALPP1Q8IXQ4 340 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 MINDY2Q8NBR6 621 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 SDR9C7Q8NEX9 313 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 OR4K13Q8NH42 304 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 DCBLD2Q96PD2 775 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 SMURF1Q9HCE7 757 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 MMP25Q9NPA2 562 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 TRIM36Q9NQ86 728 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 SNTG1Q9NSN8 517 aa16.15■□□□□ 0.18
SNX1-208ENST00000559844 C19orf25Q9UFG5 118 aaPredicted RBP16.15■□□□□ 0.18
SNX1-208ENST00000559844 hCG_2014768A0A024R1R8 64 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 IGHV3-20A0A0C4DH32 117 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 FADS1O60427 444 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 CDRT1O95170 752 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 MT-ND5P03915 603 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 GP1BBP13224 206 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 CXCR1P25024 350 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 MST1P26927 711 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 EVI2BP34910 448 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 EIF2S3P41091 472 aaKnown RBP16.14■□□□□ 0.17
SNX1-208ENST00000559844 P2RX1P51575 399 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 GGTLC2Q14390 218 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 DCDC5Q6ZRR9 648 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 PPP1R32Q7Z5V6 425 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 KLBQ86Z14 1044 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 CENPSQ8N2Z9 138 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 POMGNT2Q8NAT1 580 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 APCDD1LQ8NCL9 501 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 SMPDL3BQ92485 455 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 CEP19Q96LK0 163 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 FAIMQ9NVQ4 179 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 PCDHGB7Q9Y5F8 929 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 PCDHGB6Q9Y5F9 930 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 DMXL2Q8TDJ6 3036 aa16.14■□□□□ 0.17
SNX1-208ENST00000559844 IMPA2O14732 288 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 ASAH2BP0C7U1 165 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 OCM2P0CE71 109 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 OCMP0CE72 109 aaPredicted RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 WT1P19544 449 aaPredicted RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 CELP19835 753 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 SLC26A5P58743 744 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 TAS2R43P59537 309 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 FABP5Q01469 135 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 PAPD4Q6PIY7 484 aaKnown RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 CPEB2Q7Z5Q1 589 aaKnown RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 RAB43Q86YS6 212 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 ZFP41Q8N8Y5 198 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 OR8K3Q8NH51 312 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 SLC25A46Q96AG3 418 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 LPAR4Q99677 370 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 KCNS3Q9BQ31 491 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 RTN4RQ9BZR6 473 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 DAPK2Q9UIK4 370 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 ZNF229Q9UJW7 825 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 NOX1Q9Y5S8 564 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 NPFFR2Q9Y5X5 522 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 IQCMA0A1B0GVH7 501 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 RRP8O43159 456 aaKnown RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 NUDT14O95848 222 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 MRPL3P09001 348 aaKnown RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 CLUP10909 449 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 CD53P19397 219 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 EGR4Q05215 589 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 ATP1A4Q13733 1029 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 PON3Q15166 354 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 SPANXN2Q5MJ10 180 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 OR5L2Q8NGL0 311 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 TBX5Q99593 518 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 TM9SF2Q99805 663 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 KATNB1Q9BVA0 655 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 MROQ9BYG7 248 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 FKRPQ9H9S5 495 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 GALNT8Q9NY28 637 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 POLHQ9Y253 713 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 RAXQ9Y2V3 346 aa16.13■□□□□ 0.17
SNX1-208ENST00000559844 YARS2Q9Y2Z4 477 aaKnown RBP16.13■□□□□ 0.17
SNX1-208ENST00000559844 LOC102723996A0A087X1L8 192 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 LOC110117498-PIK3R3F6TDL0 507 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 PFDN1O60925 122 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 HIST1H2ABP04908 130 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 CD14P08571 375 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ZNF181Q2M3W8 571 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ALG10Q5BKT4 473 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ATP1A1-AS1Q5TC04 95 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 HIST3H2AQ7L7L0 130 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 SPACA3Q8IXA5 215 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 NPEPL1Q8NDH3 523 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 OR11G2Q8NGC1 345 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 MOSPD2Q8NHP6 518 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 B4GALNT2Q8NHY0 566 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ADAMTS17Q8TE56 1095 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 HIST1H2ACQ93077 130 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 BARHL1Q9BZE3 327 aa16.12■□□□□ 0.17
SNX1-208ENST00000559844 ISG20L2Q9H9L3 353 aaKnown RBP16.12■□□□□ 0.17
SNX1-208ENST00000559844 FBXL4Q9UKA2 621 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms