RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 UNQ9370/PRO34162Q6UXP9 181 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 OVCH1Q7RTY7 1134 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 ATG4DQ86TL0 474 aaPredicted RBP9.16□□□□□ -0.94
LRRC28-216ENST00000559819 CMIPQ8IY22 773 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 TIGD4Q8IY51 512 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 ZNF687Q8N1G0 1237 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 SCMH1Q96GD3 660 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 TCTN2Q96GX1 697 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 GTPBP2Q9BX10 602 aaKnown RBP9.16□□□□□ -0.94
LRRC28-216ENST00000559819 RTN4RQ9BZR6 473 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 NXF5Q9H1B4 397 aaKnown RBP9.16□□□□□ -0.94
LRRC28-216ENST00000559819 GHITMQ9H3K2 345 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 ZCCHC4Q9H5U6 513 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 A0A0C4DFX4 3053 aa9.16□□□□□ -0.94
LRRC28-216ENST00000559819 A0A1W2PPC4 97 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 CDC14CA4D256 554 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 ARPC3O15145 178 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 TSC22D2O75157 780 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 ZFPL1O95159 310 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 WISP1O95388 367 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 PTHLHP12272 177 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 CXCL3P19876 107 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 GRK6P43250 576 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 CAPZA2P47755 286 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 OR1D4P47884 311 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 EGR4Q05215 589 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 CPEB4Q17RY0 729 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC28-216ENST00000559819 PRAMEF17Q5VTA0 474 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 FNDC7Q5VTL7 733 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 JAZF1Q86VZ6 243 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 LRRC75AQ8NAA5 344 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 SNAPC3Q92966 411 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 KTI12Q96EK9 354 aaPredicted RBP9.15□□□□□ -0.94
LRRC28-216ENST00000559819 LRFN5Q96NI6 719 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 SLC38A3Q99624 504 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 NRSN2Q9GZP1 204 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP9.15□□□□□ -0.94
LRRC28-216ENST00000559819 GMEB2Q9UKD1 530 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 SPATA2Q9UM82 520 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 VCANP13611 3396 aa9.15□□□□□ -0.94
LRRC28-216ENST00000559819 ZNF879B4DU55 563 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 ARHGEF9O43307 516 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 ZNF749O43361 778 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 GATBO75879 557 aaKnown RBP9.15□□□□□ -0.95
LRRC28-216ENST00000559819 UTS2O95399 124 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 DHFRP00374 187 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 UBL4AP11441 157 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 HPGDP15428 266 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 CD1CP29017 333 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 SOX2P48431 317 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 SKP2Q13309 424 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 GRM7Q14831 915 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 ALG10Q5BKT4 473 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 SLC35D3Q5M8T2 416 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 WBP2NLQ6ICG8 309 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 FCRLAQ7L513 359 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 LINGO2Q7L985 606 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 FAM122BQ7Z309 247 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 PLCZ1Q86YW0 608 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 C9orf62Q8N4C0 152 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 CEP76Q8TAP6 659 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 PTPMT1Q8WUK0 201 aaPredicted RBP9.15□□□□□ -0.95
LRRC28-216ENST00000559819 SLX1AQ9BQ83 275 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 CACNG6Q9BXT2 260 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 GON7Q9BXV9 100 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 OR8D2Q9GZM6 311 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 RXFP3Q9NSD7 469 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 ING1Q9UK53 422 aaPredicted RBP9.15□□□□□ -0.95
LRRC28-216ENST00000559819 CAMK2AQ9UQM7 478 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 NUBP2Q9Y5Y2 271 aa9.15□□□□□ -0.95
LRRC28-216ENST00000559819 C7orf66A4D0T2 115 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 TRABD2BA6NFA1 517 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 SDC3O75056 442 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ZNF24P17028 368 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 STOMP27105 288 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 GDNFP39905 211 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 BLKP51451 505 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 PRPS1P60891 318 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 RPS15P62841 145 aaKnown RBP9.14□□□□□ -0.95
LRRC28-216ENST00000559819 PITPNAQ00169 270 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 KLF9Q13886 244 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ST3GAL2Q16842 350 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ODF4Q2M2E3 257 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 TMEM255AQ5JRV8 349 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 UBE2NLQ5JXB2 153 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ZNF684Q5T5D7 378 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 C1QTNF12Q5T7M4 302 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 FAM199XQ6PEV8 388 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-216ENST00000559819 KANSL1Q7Z3B3 1105 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 EXD3Q8N9H8 876 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 SMRP1Q8NCR6 262 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 FAM71CQ8NEG0 241 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 DNAAF1Q8NEP3 725 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 DACT3Q96B18 629 aaPredicted RBP9.14□□□□□ -0.95
LRRC28-216ENST00000559819 SLC25A38Q96DW6 304 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ADAD1Q96M93 576 aaKnown RBP9.14□□□□□ -0.95
LRRC28-216ENST00000559819 FOXN4Q96NZ1 517 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 GAL3ST4Q96RP7 486 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 ADOQ96SZ5 270 aa9.14□□□□□ -0.95
LRRC28-216ENST00000559819 OR51J1Q9H342 316 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms