RNA–Protein interactions for RNA: ENST00000558910.2

TPM1-216, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-216ENST00000558910 RBBP4Q09028 425 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 PDK3Q15120 406 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 NPTX1Q15818 432 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 VMACQ2NL98 169 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 ENTPD8Q5MY95 495 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 C8orf86Q6ZUL3 223 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TUBA1AQ71U36 451 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 PATL1Q86TB9 770 aaKnown RBP10.57□□□□□ -0.72
TPM1-216ENST00000558910 ZIC4Q8N9L1 334 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 PCYOX1LQ8NBM8 494 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 STK35Q8TDR2 534 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TSPEARQ8WU66 669 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 SLC38A4Q969I6 547 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 SLC47A1Q96FL8 570 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TPD52L3Q96J77 140 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 ALKBH3Q96Q83 286 aaPredicted RBP10.57□□□□□ -0.72
TPM1-216ENST00000558910 PARPBPQ9NWS1 579 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 GID8Q9NWU2 228 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TESQ9UGI8 421 aaKnown RBP10.57□□□□□ -0.72
TPM1-216ENST00000558910 LAMP3Q9UQV4 416 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 SH3GLB1Q9Y371 365 aa10.57□□□□□ -0.72
TPM1-216ENST00000558910 TRAV36DV7A0A075B6V5 113 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 A0A096LPE4 126 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 A0A0B4J2E0 115 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 A0A1B0GX12 115 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 A0A1W2PPZ6 126 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 C11orf98E9PRG8 122 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 FXYD1O00168 92 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 UPK3AO75631 287 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SEC14L2O76054 403 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 LGI1O95970 557 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 COX4I1P13073 169 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 HLA-DOBP13765 273 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 ZNF43P17038 809 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 CD247P20963 164 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 AHCYP23526 432 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 OR1E2P47887 323 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 P2RY4P51582 365 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SLC16A1P53985 500 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 PCBP3P57721 371 aaKnown RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 NKX6-1P78426 367 aaPredicted RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 SPOCK1Q08629 439 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 HIKESHIQ53FT3 197 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 INTS11Q5TA45 600 aaKnown RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 ULK3Q6PHR2 472 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 CREB3L2Q70SY1 520 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SPATA21Q7Z572 469 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 CARM1Q86X55 608 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 MFSD8Q8NHS3 518 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 DNAJA4Q8WW22 397 aaPredicted RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 PROX1Q92786 737 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 RADILQ96JH8 1075 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 ZNF317Q96PQ6 595 aaPredicted RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 ARHGDIGQ99819 225 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 FOXC2Q99958 501 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SH3GL1Q99961 368 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 EMC6Q9BV81 110 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 GSX2Q9BZM3 304 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SLCO5A1Q9H2Y9 848 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 CCDC134Q9H6E4 229 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 ESRP2Q9H6T0 727 aaKnown RBP10.56□□□□□ -0.72
TPM1-216ENST00000558910 NGBQ9NPG2 151 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 TAS2R16Q9NYV7 291 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 NPAP1Q9NZP6 1156 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 POU2F3Q9UKI9 436 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 SLC7A7Q9UM01 511 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 RNF115Q9Y4L5 304 aa10.56□□□□□ -0.72
TPM1-216ENST00000558910 OR5H1A6NKK0 313 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 BBIP1A8MTZ0 92 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 FTCDNL1E5RQL4 147 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 ABCD4O14678 606 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 SMAD7O15105 426 aaKnown RBP10.55□□□□□ -0.72
TPM1-216ENST00000558910 GSTA4O15217 222 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 NPIPB7O75200 414 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 GOSR1O95249 250 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 CH25HO95992 272 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 HPRP00739 348 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 UMPSP11172 480 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 CD99P14209 185 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 COX5AP20674 150 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 HOXC12P31275 282 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 YAP1P46937 504 aaKnown RBP10.55□□□□□ -0.72
TPM1-216ENST00000558910 GZMMP51124 257 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 MAP2K6P52564 334 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 NR1H2P55055 460 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 CDH11P55287 796 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 GNGT1P63211 74 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 LTBQ06643 244 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 PMS2P3Q13401 168 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 GABRA6Q16445 453 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 NRF1Q16656 503 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 NCMAPQ5T1S8 102 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 Q71RC1 249 aaPredicted RBP10.55□□□□□ -0.72
TPM1-216ENST00000558910 NET1Q7Z628 596 aaPredicted RBP10.55□□□□□ -0.72
TPM1-216ENST00000558910 CPLX4Q7Z7G2 160 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 TSPYL5Q86VY4 417 aaPredicted RBP10.55□□□□□ -0.72
TPM1-216ENST00000558910 TREML1Q86YW5 311 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 EPHX4Q8IUS5 362 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 LSMEM1Q8N8F7 131 aa10.55□□□□□ -0.72
TPM1-216ENST00000558910 BHLHE22Q8NFJ8 381 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms