RNA–Protein interactions for RNA: ENST00000558836.5

CUX1-217, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 2,965 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-217ENST00000558836 ADAMTS9Q9P2N4 1935 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 FREM3P0C091 2139 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 RTTNQ86VV8 2226 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 OR2T7P0C7T2 308 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 PNMTP11086 282 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 CXCR1P25024 350 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 EDNRAP25101 427 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 CASP3P42574 277 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 PRPS1P60891 318 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 SIRPAP78324 504 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 BDH1Q02338 343 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 BICRALQ6AI39 1079 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 PWWP2BQ6NUJ5 590 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 MTFR2Q6P444 385 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 SFXN4Q6P4A7 337 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 KANSL1Q7Z3B3 1105 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 NANOGNBQ7Z5D8 188 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 ZBTB8BQ8NAP8 495 aaPredicted RBP9.65□□□□□ -0.86
CUX1-217ENST00000558836 OR2T27Q8NH04 317 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 PIGKQ92643 395 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 CLDN23Q96B33 292 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 COQ7Q99807 217 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 BEX2Q9BXY8 128 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 CHRNA10Q9GZZ6 450 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 SYT4Q9H2B2 425 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 ENAMQ9NRM1 1142 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 INPP5EQ9NRR6 644 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 GRHPRQ9UBQ7 328 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 FBXO9Q9UK97 447 aaPredicted RBP9.65□□□□□ -0.86
CUX1-217ENST00000558836 BDP1A6H8Y1 2624 aa9.65□□□□□ -0.86
CUX1-217ENST00000558836 ACOD1A6NK06 481 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 ARHGEF9O43307 516 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 SIGLEC6O43699 453 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 OR8G3PP0DMU2 310 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 GALNSP34059 522 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 KIR2DL3P43628 341 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 TMED10P49755 219 aaKnown RBP9.65□□□□□ -0.87
CUX1-217ENST00000558836 RAB25P57735 213 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 NANOS3P60323 173 aaKnown RBP9.65□□□□□ -0.87
CUX1-217ENST00000558836 ACTC1P68032 377 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 ACTA1P68133 377 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 CCL7P80098 99 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 GPR50Q13585 617 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 LINC01590Q5TEZ4 76 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 TRIQKQ629K1 86 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 ZNF517Q6ZMY9 492 aaPredicted RBP9.65□□□□□ -0.87
CUX1-217ENST00000558836 ASB18Q6ZVZ8 466 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 COX15Q7KZN9 410 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 FAM122BQ7Z309 247 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 OR6V1Q8N148 313 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 OR5H6Q8NGV6 325 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 MAFAQ8NHW3 353 aaPredicted RBP9.65□□□□□ -0.87
CUX1-217ENST00000558836 SLC35B4Q969S0 331 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 TXNDC15Q96J42 360 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 TSPAN32Q96QS1 320 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 WACQ9BTA9 647 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 SLC25A18Q9H1K4 315 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 WDR76Q9H967 626 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 GALNT9Q9HCQ5 603 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 KLHL21Q9UJP4 597 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 HIF3AQ9Y2N7 669 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 MRPS7Q9Y2R9 242 aaKnown RBP9.65□□□□□ -0.87
CUX1-217ENST00000558836 SLC6A5Q9Y345 797 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 PCDHGB2Q9Y5G2 931 aa9.65□□□□□ -0.87
CUX1-217ENST00000558836 PATE3B3GLJ2 98 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ARPC3O15145 178 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 LANCL1O43813 399 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 TSPAN2O60636 221 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 CCNKO75909 580 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 CD14P08571 375 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ASAH2BP0C7U1 165 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 MTNR1BP49286 362 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 CENPAP49450 140 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 GBX2P52951 348 aaPredicted RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 FBXW4P57775 412 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 KRR1Q13601 381 aaKnown RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 MESTQ5EB52 335 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 LYSMD4Q5XG99 296 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 LCN10Q6JVE6 187 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 SLITRK4Q8IW52 837 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ZNF440Q8IYI8 595 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 GDPD1Q8N9F7 314 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 FAM181AQ8N9Y4 354 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 C19orf18Q8NEA5 215 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 OR4M1Q8NGD0 313 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 OR14A16Q8NHC5 309 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ATOH1Q92858 354 aaPredicted RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 MN1Q10571 1320 aaPredicted RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 KIF26BQ2KJY2 2108 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 B4DXG7 233 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 SHISA8B8ZZ34 492 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 HIST1H2ABP04908 130 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 CFIP05156 583 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 TFPIP10646 304 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 PSKH1P11801 424 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 SNRPBP14678 240 aaKnown RBP9.64□□□□□ -0.87
CUX1-217ENST00000558836 MYL9P24844 172 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 THBS2P35442 1172 aa9.64□□□□□ -0.87
CUX1-217ENST00000558836 ADH7P40394 386 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms