RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 ATAD3AQ9NVI7 634 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 MAGEL2Q9UJ55 1249 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 MKLN1Q9UL63 735 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 MOKQ9UQ07 419 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 HDGFL3Q9Y3E1 203 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 FLVCR1Q9Y5Y0 555 aa8.4□□□□□ -1.06
SPG11-212ENST00000558790 SPIN1Q9Y657 262 aaPredicted RBP8.4□□□□□ -1.06
SPG11-212ENST00000558790 RNF103-CHMP3A0A140T963 221 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 LOC390937A0A1W2PQ73 354 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 DBX1A6NMT0 343 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 COPEO14579 308 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 CFLARO15519 480 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 DNPH1O43598 174 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 PEX11AO75192 247 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 STX11O75558 287 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 SLU7O95391 586 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 AK1P00568 194 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 TGFAP01135 160 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 SHBGP04278 402 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 ZNF23P17027 643 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 ITGA2P17301 1181 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 APEX1P27695 318 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 RYKP34925 604 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 APOBEC1P41238 236 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 MAGEA8P43361 318 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 H3F3AP84243 136 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 FUT5Q11128 374 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 SQLEQ14534 574 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 ARHGAP11BQ3KRB8 267 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 LSM12Q3MHD2 195 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 HIKESHIQ53FT3 197 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 TSPO2Q5TGU0 170 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 EIF3MQ7L2H7 374 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 C16orf62Q7Z3J2 963 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 SLC46A3Q7Z3Q1 461 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 GRINAQ7Z429 371 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 HMGN2P46Q86SG4 172 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 MEX3DQ86XN8 651 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 GSPT2Q8IYD1 628 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 CLECL1Q8IZS7 167 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 C4orf33Q8N1A6 199 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 ZNF563Q8TA94 476 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 ANP32BQ92688 251 aaKnown RBP8.39□□□□□ -1.07
SPG11-212ENST00000558790 COQ8BQ96D53 544 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 PPP3R2Q96LZ3 170 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 C3orf30Q96M34 536 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 C14orf119Q9NWQ9 140 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 UPB1Q9UBR1 384 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 SLC9A8Q9Y2E8 581 aa8.39□□□□□ -1.07
SPG11-212ENST00000558790 IGHV1-18A0A0C4DH31 117 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 LRP5LA4QPB2 252 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SMIM23A6NLE4 172 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 CLDN24A6NM45 220 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 ANKRD28O15084 1053 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 TCF21O43680 179 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SKAP2O75563 359 aaPredicted RBP8.38□□□□□ -1.07
SPG11-212ENST00000558790 CDH2P19022 906 aaPredicted RBP8.38□□□□□ -1.07
SPG11-212ENST00000558790 CCNA2P20248 432 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 MATN1P21941 496 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 MPGP29372 298 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 IL2RGP31785 369 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 CCT5P48643 541 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SCAND1P57086 179 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 OR2B6P58173 313 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 TGFBR3Q03167 851 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SLC17A1Q14916 467 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 IQCCQ4KMZ1 466 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 ATP6AP1LQ52LC2 224 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 LIPNQ5VXI9 398 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 TYW3Q6IPR3 259 aaKnown RBP8.38□□□□□ -1.07
SPG11-212ENST00000558790 KLHL24Q6TFL4 600 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 C6orf120Q7Z4R8 191 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SPATA19Q7Z5L4 167 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 ADGRG3Q86Y34 549 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 RIMKLAQ8IXN7 391 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 RFLNBQ8N5W9 214 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 NATD1Q8N6N6 113 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 FNDC5Q8NAU1 212 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 MNS1Q8NEH6 495 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 VRK1Q99986 396 aaPredicted RBP8.38□□□□□ -1.07
SPG11-212ENST00000558790 DUSP26Q9BV47 211 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 MECRQ9BV79 373 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 OR51I1Q9H343 314 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 MYOZ1Q9NP98 299 aaPredicted RBP8.38□□□□□ -1.07
SPG11-212ENST00000558790 CA10Q9NS85 328 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 TMEM181Q9P2C4 612 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 SLC35A3Q9Y2D2 325 aa8.38□□□□□ -1.07
SPG11-212ENST00000558790 TMED7-TICAM2A0A0A6YYA0 188 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 TMEM72A0PK05 275 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 DUXAA6NLW8 204 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 AP3D1O14617 1153 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 KLF11O14901 512 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 TRIM13O60858 407 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 LYPLA1O75608 230 aaPredicted RBP8.37□□□□□ -1.07
SPG11-212ENST00000558790 FGF4P08620 206 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 KRT4P19013 534 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 PRPS1L1P21108 318 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 ARRB2P32121 409 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 SERPINF1P36955 418 aa8.37□□□□□ -1.07
SPG11-212ENST00000558790 PPOXP50336 477 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms