RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 OR52N1Q8NH53 320 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 KCNE4Q8WWG9 221 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 NTNG2Q96CW9 530 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 Q96M85 177 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 NMNAT3Q96T66 252 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 OR51V1Q9H2C8 321 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 ZNF160Q9HCG1 818 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 KLHL1Q9NR64 748 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 KLHL21Q9UJP4 597 aa11.71□□□□□ -0.53
SMAD3-207ENST00000558763 YARS2Q9Y2Z4 477 aaKnown RBP11.71□□□□□ -0.53
SMAD3-207ENST00000558763 CHCHD2Q9Y6H1 151 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-207ENST00000558763 NSG1A0A0A6YYJ2 146 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 BLOC1S5-TXNDC5H3BN57 136 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 IDH3BO43837 385 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ITGA10O75578 1167 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TFP02787 698 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 RPL4P36578 427 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 OPRL1P41146 370 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TMED10P49755 219 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 BMXP51813 675 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ATP1A4Q13733 1029 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 MOGQ16653 247 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ANKDD1AQ495B1 522 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ALG10Q5BKT4 473 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF322Q6U7Q0 402 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 USP43Q70EL4 1123 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 RAB43Q86YS6 212 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ARMC10Q8N2F6 343 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 M1APQ8TC57 530 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 SLC22A8Q8TCC7 542 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ST8SIA1Q92185 356 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 FAM117AQ9C073 453 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 OR11A1Q9GZK7 315 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 P4HTMQ9NXG6 502 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TAS2R5Q9NYW4 299 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 MED11Q9P086 117 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 WIF1Q9Y5W5 379 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 SPIN1Q9Y657 262 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 MED12Q93074 2177 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TEX13CA0A0J9YWL9 993 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 FTCDNL1E5RQL4 147 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 KLK10O43240 276 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 PRKAR1AP10644 381 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 WT1P19544 449 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 CDKN2AP42771 156 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TUBA1BP68363 451 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 INPP5JQ15735 1006 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 EXT1Q16394 746 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TIMM50Q3ZCQ8 353 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 LINC01590Q5TEZ4 76 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TUBA1AQ71U36 451 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 NDUFAF7Q7L592 441 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 RFLNBQ8N5W9 214 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 SLC15A4Q8N697 577 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ACBD7Q8N6N7 88 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 FAM98AQ8NCA5 519 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF248Q8NDW4 579 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ADAMTS17Q8TE56 1095 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 SMAP2Q8WU79 429 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 DNAJA3Q96EY1 480 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 TSPAN32Q96QS1 320 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 NXF2Q9GZY0 626 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ISG20L2Q9H9L3 353 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 AKIP1Q9NQ31 210 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 CHCHD3Q9NX63 227 aaKnown RBP11.7□□□□□ -0.54
SMAD3-207ENST00000558763 ZMIZ1Q9ULJ6 1067 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 PCDHGB6Q9Y5F9 930 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 CORINQ9Y5Q5 1042 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 APC2O95996 2303 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 IGF2RP11717 2491 aa11.7□□□□□ -0.54
SMAD3-207ENST00000558763 METTL15A6NJ78 407 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 A8MVM7 634 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 F13BP05160 661 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 MRPL3P09001 348 aaKnown RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 SPI1P17947 270 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 PAICSP22234 425 aaKnown RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 SDHAP31040 664 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 CASP3P42574 277 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 RPS25P62851 125 aaKnown RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 ZNF85Q03923 595 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 DCTN2Q13561 401 aaKnown RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 DGUOKQ16854 277 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 MESTQ5EB52 335 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 FAM69AQ5T7M9 428 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 C1orf140Q5VVS0 124 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 CD200R1LQ6Q8B3 271 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 LINC00299Q6ZSB3 139 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 KLHL36Q8N4N3 616 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 C10orf53Q8N6V4 93 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 LSM14AQ8ND56 463 aaKnown RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 STK35Q8TDR2 534 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 SPRYD4Q8WW59 207 aaPredicted RBP11.69□□□□□ -0.54
SMAD3-207ENST00000558763 FRMD6Q96NE9 622 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 ALG8Q9BVK2 526 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 CDADC1Q9BWV3 514 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 OCEL1Q9H607 264 aa11.69□□□□□ -0.54
SMAD3-207ENST00000558763 SH2D2AQ9NP31 389 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms