RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 RIMS3Q9UJD0 308 aa11.03□□□□□ -0.64
SLIRP-209ENST00000557342 CIB4A0PJX0 185 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 DEFB108AA8MXU0 73 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 LYZL6O75951 148 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 KRT33AO76009 404 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 OR6A2O95222 327 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 HIST1H2ABP04908 130 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 THBDP07204 575 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 CALB2P22676 271 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 NR1H2P55055 460 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 CLDN17P56750 224 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 SLC25A3Q00325 362 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 TGFBR3Q03167 851 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 LTBQ06643 244 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 PMS2P3Q13401 168 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 PIN1Q13526 163 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-209ENST00000557342 TSC22D1Q15714 1073 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 ZNF74Q16587 644 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 BEX5Q5H9J7 111 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 TIMM23BQ5SRD1 257 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 TSPO2Q5TGU0 170 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 OR7E24Q6IFN5 339 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 NIPAL3Q6P499 406 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 WDR88Q6ZMY6 472 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 HIST3H2AQ7L7L0 130 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 CDH24Q86UP0 819 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 TSPYL5Q86VY4 417 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-209ENST00000557342 WFDC8Q8IUA0 241 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 EPHX4Q8IUS5 362 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 UEVLDQ8IX04 471 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 KDM8Q8N371 416 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 ZNF433Q8N7K0 673 aaPredicted RBP11.02□□□□□ -0.65
SLIRP-209ENST00000557342 OR5J2Q8NH18 312 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 HIST1H2ACQ93077 130 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 MUCL1Q96DR8 90 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 PIK3IP1Q96FE7 263 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 MOGAT1Q96PD6 335 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 CDRT15Q96T59 188 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 PRSS27Q9BQR3 290 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 FKRPQ9H9S5 495 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 NANSQ9NR45 359 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 MAGEL2Q9UJ55 1249 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 SAMD4AQ9UPU9 718 aaKnown RBP11.02□□□□□ -0.65
SLIRP-209ENST00000557342 RCE1Q9Y256 329 aa11.02□□□□□ -0.65
SLIRP-209ENST00000557342 HTR3EA5X5Y0 456 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 B2RBV5 119 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MS4A18H0YCH9 400 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 CH25HO95992 272 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 IGF2P01344 180 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MT-ND1P03886 318 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 NCK1P16333 377 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 PTNP21246 168 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MPGP29372 298 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 DNAJA1P31689 397 aaKnown RBP11.01□□□□□ -0.65
SLIRP-209ENST00000557342 PUDPQ08623 228 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 TAB1Q15750 504 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 STK11Q15831 433 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 FXNQ16595 210 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MS4A18Q3C1V0 323 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 C1QTNF12Q5T7M4 302 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 C22orf34Q6ZV56 151 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 VTCN1Q7Z7D3 282 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 CYP4Z1Q86W10 505 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 LURAP1LQ8IV03 231 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 NKAIN4Q8IVV8 208 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 DEFB107AQ8IZN7 70 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 RNF148Q8N7C7 305 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 C1orf162Q8NEQ5 155 aaPredicted RBP11.01□□□□□ -0.65
SLIRP-209ENST00000557342 TMEM239Q8WW34 195 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 NINJ1Q92982 152 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 HSH2DQ96JZ2 352 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 FNDC11Q9BVV2 318 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 LINC00470Q9BZP3 86 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 AMBRA1Q9C0C7 1298 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 GORASP2Q9H8Y8 452 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 DCAF13Q9NV06 445 aaKnown RBP11.01□□□□□ -0.65
SLIRP-209ENST00000557342 B3GAT1Q9P2W7 334 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 SEC14L4Q9UDX3 406 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 CD300AQ9UGN4 299 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 ZNF229Q9UJW7 825 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 A4GNTQ9UNA3 340 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MED31Q9Y3C7 131 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 NOX1Q9Y5S8 564 aa11.01□□□□□ -0.65
SLIRP-209ENST00000557342 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11□□□□□ -0.65
SLIRP-209ENST00000557342 OR5H1A6NKK0 313 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 ZNF587BE7ETH6 402 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 LRRN3E7EW58 273 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 PDLIM1O00151 329 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 KPNA4O00629 521 aaPredicted RBP11□□□□□ -0.65
SLIRP-209ENST00000557342 PLPP3O14495 311 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 SIAH2O43255 324 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 KLF4O43474 513 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 SLC43A1O75387 559 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 RAD51DO75771 328 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 ITGA5P08648 1049 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 ADORA3P0DMS8 318 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 UMPSP11172 480 aa11□□□□□ -0.65
SLIRP-209ENST00000557342 TCN1P20061 433 aaPredicted RBP11□□□□□ -0.65
SLIRP-209ENST00000557342 AHCYP23526 432 aa11□□□□□ -0.65
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