RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 DSPPQ9NZW4 1301 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TRBV23-1A0A0A0MS06 115 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 GXYLT2A0PJZ3 443 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 MYO1GB0I1T2 1018 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 RNASEK-C17orf49H0YIS7 233 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 ETV2O00321 342 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 UPK1AO00322 258 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 NR5A2O00482 541 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TNFRSF13BO14836 293 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SKAP2O75563 359 aaPredicted RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TGDSO95455 350 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 H6PDO95479 791 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 PMS2P2O95744 297 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 LGI1O95970 557 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 IGKV1D-16P01601 117 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 IFNW1P05000 195 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SBK2P0C263 348 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CTAGE8P0CG41 777 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CLK1P49759 484 aaKnown RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TERF1P54274 439 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TAS2R39P59534 338 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 ZNF117Q03924 483 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CRYMQ14894 314 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 HEPACAMQ14CZ8 416 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 PRSS53Q2L4Q9 553 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 NSUN5P1Q3KNT7 163 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TIGD2Q4W5G0 525 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SYT14P1Q58G82 188 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SPANXN3Q5MJ09 141 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TEDDM1Q5T9Z0 273 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CCDC103Q8IW40 242 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CTAGE4Q8IX94 777 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 OR2L13Q8N349 312 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TMCO5AQ8N6Q1 288 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 C11orf44Q8N8P7 122 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 L3MBTL4Q8NA19 623 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SDR9C7Q8NEX9 313 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 STAG3L4Q8TBR4 150 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM234Q8WY98 164 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 DDB2Q92466 427 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 DPF1Q92782 380 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM45BQ96B21 275 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 EXOSC8Q96B26 276 aaKnown RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 THOC1Q96FV9 657 aaKnown RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 MAP6Q96JE9 813 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CCDC140Q96MF4 163 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 AMDHD1Q96NU7 426 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 GPR61Q9BZJ8 451 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TRIM15Q9C019 465 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 NMUR2Q9GZQ4 415 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 HOXD1Q9GZZ0 328 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 IQCGQ9H095 443 aaKnown RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CNTD2Q9H8S5 307 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SEC61A2Q9H9S3 476 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 SAP30LQ9HAJ7 183 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 PATZ1Q9HBE1 687 aaKnown RBP4.81□□□□□ -1.64
ATXN3-245ENST00000556958 TAAR3PQ9P1P4 343 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 CARD8Q9Y2G2 431 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 HDGFL3Q9Y3E1 203 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 USH1CQ9Y6N9 552 aa4.81□□□□□ -1.64
ATXN3-245ENST00000556958 EXPH5Q8NEV8 1989 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM82A0PJX8 343 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 ANKRD61A6NGH8 418 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 A8MXK9 166 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 ANGPTL7O43827 346 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 MGRN1O60291 552 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 EIF4E2O60573 245 aaKnown RBP4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CELA3BP08861 270 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TSPAN8P19075 237 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 STX2P32856 288 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CRHR1P34998 444 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 ASMTP46597 345 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 IER3P46695 156 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 NCBP2P52298 156 aaKnown RBP eCLIP4.8□□□□□ -1.645e-7■■■■□ 25.1
ATXN3-245ENST00000556958 OR2B6P58173 313 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TUBA1BP68363 451 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TUBA4AP68366 448 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 SLC35A2P78381 396 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 MERTKQ12866 999 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 IFT88Q13099 833 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 PDE7AQ13946 482 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CBFBQ13951 182 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 SLC17A1Q14916 467 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 QPRTQ15274 297 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CD226Q15762 336 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TOMM34Q15785 309 aaPredicted RBP4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TMEM155Q4W5P6 130 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 PRAMEF8Q5VWM4 474 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 PRAMEF7Q5VXH5 474 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 CLEC6AQ6EIG7 209 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 C6orf89Q6UWU4 347 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 LRIG3Q6UXM1 1119 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 TUBA1AQ71U36 451 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 LRP11Q86VZ4 500 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 LRRC57Q8N9N7 239 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 OR5W2Q8NH69 310 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 UBTD2Q8WUN7 234 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 RAB40AQ8WXH6 277 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 PIK3R3Q92569 461 aa4.8□□□□□ -1.64
ATXN3-245ENST00000556958 ATP6V1E2Q96A05 226 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms