RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 GNPDA2Q8TDQ7 276 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 GMPPAQ96IJ6 420 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 GPA33Q99795 319 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 Q9UFV3 132 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 ERRFI1Q9UJM3 462 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 MAGED1Q9Y5V3 778 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 MED12Q93074 2177 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 PCNX3Q9H6A9 2034 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 SHANK1Q9Y566 2161 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF407Q9C0G0 2248 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 UNC119BA6NIH7 251 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 SAC3D1A6NKF1 404 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 HSPB2A8KAH6 182 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 GASTP01350 101 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 BMP5P22003 454 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 CEACAM8P31997 349 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 AQP2P41181 271 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 P2RY4P51582 365 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 ADORA2A-AS1P86434 159 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 POU3F1Q03052 451 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 GK3PQ14409 553 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 HSPB2Q16082 182 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 EEF1A1P5Q5VTE0 462 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 MTFR2Q6P444 385 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 OR9K2Q8NGE7 335 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 MOSPD2Q8NHP6 518 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 SDCCAG3Q96C92 435 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 CENPNQ96H22 339 aaPredicted RBP12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 TNFRSF13CQ96RJ3 184 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 FEVQ99581 238 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 C12orf49Q9H741 205 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 COQ3Q9NZJ6 369 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 EMC3Q9P0I2 261 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 KIF17Q9P2E2 1029 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 RNF6Q9Y252 685 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 EMC9Q9Y3B6 208 aa12.51□□□□□ -0.41
VIPAS39-208ENST00000556412 A0A1W2PNV4 684 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF716A6NP11 495 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 G3V2T6 193 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZG16O60844 167 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SS18L1O75177 396 aaPredicted RBP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SMNDC1O75940 238 aaKnown RBP eCLIP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 AGFG2O95081 481 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 VAMP5O95183 116 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 HPRP00739 348 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 F13BP05160 661 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 YES1P07947 543 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 HLA-DOBP13765 273 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF43P17038 809 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 AGTR1P30556 359 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SMSP52788 366 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 RPL18Q07020 188 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SLC17A1Q14916 467 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 RCN1Q15293 331 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 C1orf94Q6P1W5 598 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SHQ1Q6PI26 577 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 FAM214BQ7L5A3 538 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 IGFN1Q86VF2 1251 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZDHHC13Q8IUH4 622 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 UEVLDQ8IX04 471 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ATG16L2Q8NAA4 619 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 OR5K1Q8NHB7 308 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 ZFP3Q96NJ6 502 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 OXGR1Q96P68 337 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 SF3B5Q9BWJ5 86 aaKnown RBP12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 GLRX2Q9NS18 164 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 TAS2R5Q9NYW4 299 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 IL20RAQ9UHF4 553 aa12.5□□□□□ -0.41
VIPAS39-208ENST00000556412 MS4A18H0YCH9 400 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 GPR171O14626 319 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 FPR3P25089 353 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 CTSSP25774 331 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 RPL4P36578 427 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 SLC9A3P48764 834 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 TAF11Q15544 211 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 MS4A18Q3C1V0 323 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ZBED5Q49AG3 693 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ALG10Q5BKT4 473 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF770Q6IQ21 691 aaPredicted RBP12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 VWA1Q6PCB0 445 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 STK32CQ86UX6 486 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 PQLC1Q8N2U9 271 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ADPRHL1Q8NDY3 354 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 LIPHQ8WWY8 451 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 NIPSNAP1Q9BPW8 284 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ZNF556Q9HAH1 456 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 B3GAT1Q9P2W7 334 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 ING1Q9UK53 422 aaPredicted RBP12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 OAZ3Q9UMX2 235 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 MGAT4BQ9UQ53 548 aa12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 NOSIPQ9Y314 301 aaKnown RBP12.49□□□□□ -0.41
VIPAS39-208ENST00000556412 EEF1E1-BLOC1S5C9J1V9 151 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 EEF1E1O43324 174 aaKnown RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 KLF4O43474 513 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 FZD7O75084 574 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 KIR2DL2P43627 348 aaPredicted RBP12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 TSPAN31Q12999 210 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 CASP12Q6UXS9 341 aa12.48□□□□□ -0.41
VIPAS39-208ENST00000556412 NUFIP2Q7Z417 695 aaKnown RBP12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms