RNA–Protein interactions for RNA: ENST00000556017.1

CHMP4BP1-201, Transcript of charged multivesicular body protein 4B pseudogene 1, humanhuman

BASIC

Gene CHMP4BP1, Length 588 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BP1-201ENST00000556017 PRDM4Q9UKN5 801 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF443Q9Y2A4 671 aaPredicted RBP12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MEGF8Q7Z7M0 2845 aa12.41□□□□□ -0.42
CHMP4BP1-201ENST00000556017 hCG_2039718K7EN88 272 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 DAOP14920 347 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 HOXB9P17482 250 aaPredicted RBP12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CDH15P55291 814 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 HOXC5Q00444 222 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 BST1Q10588 318 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IQCCQ4KMZ1 466 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PEX5LQ8IYB4 626 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CDK20Q8IZL9 346 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TMEM123Q8N131 208 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 ZNF786Q8N393 782 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 CADM2Q8N3J6 435 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 TRIML2Q8N7C3 387 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 OR4F15Q8NGB8 312 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 MFSD8Q8NHS3 518 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 STK35Q8TDR2 534 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 WDR55Q9H6Y2 383 aaPredicted RBP12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 GPR35Q9HC97 309 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 SSU72Q9NP77 194 aaKnown RBP12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 B3GNT2Q9NY97 397 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 RASD1Q9Y272 281 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 PKD1L1Q8TDX9 2849 aa12.4□□□□□ -0.42
CHMP4BP1-201ENST00000556017 IGKV1D-42A0A075B6H8 117 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 OR6C65A6NJZ3 312 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TRAF3IP2O43734 574 aaPredicted RBP12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 BCHEP06276 602 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NUDT7P0C024 238 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZCCHC18P0CG32 403 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HOXB1P14653 301 aaPredicted RBP12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ITGA2P17301 1181 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NPR2P20594 1047 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 EPHA3P29320 983 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CLDN17P56750 224 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 UBE2NP61088 152 aaKnown RBP12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 GNA13Q14344 377 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SQLEQ14534 574 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LIN52Q52LA3 116 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MDP1Q86V88 176 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CARM1Q86X55 608 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MEX3DQ86XN8 651 aaKnown RBP12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ANKK1Q8NFD2 765 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TMEM19Q96HH6 336 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SNX18Q96RF0 628 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SPATA9Q9BWV2 254 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TAPBPLQ9BX59 468 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RAB1BQ9H0U4 201 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF224Q9NZL3 707 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RCE1Q9Y256 329 aa12.39□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KRT33AO76009 404 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SEC14L2O76054 403 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SNUPNO95149 360 aaKnown RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HPRP00739 348 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 UQCRBP14927 111 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HNF1AP20823 631 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 PAX7P23759 505 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HTR2AP28223 471 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RPS5P46782 204 aaKnown RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SH3BGRP55822 239 aaPredicted RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 STX3Q13277 289 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CEACAM16Q2WEN9 425 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 C6orf89Q6UWU4 347 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MAVSQ7Z434 540 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 C10orf111Q8N326 155 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MREGQ8N565 214 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RFLNBQ8N5W9 214 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 NEU4Q8WWR8 484 aaPredicted RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 HPS1Q92902 700 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TAAR8Q969N4 342 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 OR2M2Q96R28 347 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RACGAP1Q9H0H5 632 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TPT1P8Q9HAU6 139 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 P2RX2Q9UBL9 471 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TMEFF2Q9UIK5 374 aaPredicted RBP12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 MGAM2Q2M2H8 2515 aa12.38□□□□□ -0.43
CHMP4BP1-201ENST00000556017 A0A096LPI6 279 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 M0R082 166 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 RFXANKO14593 260 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 WNT9BO14905 357 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 TM9SF1O15321 606 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SNNO75324 88 aaPredicted RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KRT75O95678 551 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 APEX1P27695 318 aaKnown RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 CRISP3P54108 245 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 WDR4P57081 412 aaKnown RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 DSTNP60981 165 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 POU3F1Q03052 451 aaPredicted RBP12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ADRM1Q16186 407 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 KRT71Q3SY84 523 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ELFN2Q5R3F8 820 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ATG16L1Q676U5 607 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 SPATA21Q7Z572 469 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 LINC01356Q8N9X3 169 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 OR9I1Q8NGQ6 314 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 ZNF417Q8TAU3 575 aa12.37□□□□□ -0.43
CHMP4BP1-201ENST00000556017 UBASH3BQ8TF42 649 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms