RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 ZNF814B7Z6K7 855 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 MS4A18H0YCH9 400 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 ACOT7O00154 380 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 SULT2B1O00204 365 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 PLPP3O14495 311 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 EIF1AYO14602 144 aaKnown RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 ZZEF1O43149 2961 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 RNF13O43567 381 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 WBP4O75554 376 aaKnown RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 PLGP00747 810 aaPredicted RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 HLA-DOBP13765 273 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 GABRB1P18505 474 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 POU3F2P20265 443 aaPredicted RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 GTF2E2P29084 291 aaKnown RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 SLC6A6P31641 620 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 RANBP1P43487 201 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 CHN2P52757 468 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 CLDN15P56746 228 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 CTXN1P60606 82 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 SRYQ05066 204 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 SGCBQ16585 318 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 MS4A18Q3C1V0 323 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 PLEKHN1Q494U1 663 aaPredicted RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 TRILQ7L0X0 811 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 FAM109AQ8N4B1 249 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 TMEM99Q8N816 258 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 LRRC75AQ8NAA5 344 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 KLHL15Q96M94 604 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 ERMAPQ96PL5 475 aaPredicted RBP9.16□□□□□ -0.94
SRP54-208ENST00000555557 TAAR6Q96RI8 345 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 KATNB1Q9BVA0 655 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 ASPNQ9BXN1 380 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 AMBNQ9NP70 447 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 PNPLA3Q9NST1 481 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 HDGFL3Q9Y3E1 203 aa9.16□□□□□ -0.94
SRP54-208ENST00000555557 IGHV3-15A0A0B4J1V0 119 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 TFECO14948 347 aaPredicted RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 SURF4O15260 269 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ZNHIT1O43257 154 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 XPNPEP2O43895 674 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 RAMP1O60894 148 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 TSPAN19P0C672 248 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ZNF24P17028 368 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 FKBP2P26885 142 aaKnown RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 NOS3P29474 1203 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 PCYT1AP49585 367 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 CLK1P49759 484 aaKnown RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 EFNB1P98172 346 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 LINC00303Q3SY05 128 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 C6orf141Q5SZD1 244 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 DPY19L2P2Q6ZN68 376 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ASB18Q6ZVZ8 466 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 H1FNTQ75WM6 255 aaPredicted RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 GGNQ86UU5 652 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 DEPDC4Q8N2C3 294 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 GHDCQ8N2G8 530 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 LNX2Q8N448 690 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 FAM98AQ8NCA5 519 aaKnown RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 BPIFB6Q8NFQ5 453 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 OR6S1Q8NH40 331 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 FBLIM1Q8WUP2 373 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 SNRNP27Q8WVK2 155 aaKnown RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 MIB2Q96AX9 1013 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 FAM192AQ9GZU8 254 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 LDAHQ9H6V9 325 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 EXO5Q9H790 373 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ZDHHC11Q9H8X9 412 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 NRIP3Q9NQ35 241 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ALKBH4Q9NXW9 302 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 MRPL39Q9NYK5 338 aaKnown RBP9.15□□□□□ -0.94
SRP54-208ENST00000555557 SCOCQ9UIL1 159 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 HSPE1-MOB4S4R3N1 261 aa9.15□□□□□ -0.94
SRP54-208ENST00000555557 ALPK2Q86TB3 2170 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 ZNF407Q9C0G0 2248 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 FAM183AA6NL82 134 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 IMPA2O14732 288 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 OR6A2O95222 327 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 LYNP07948 512 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 HIST1H1CP16403 213 aaKnown RBP9.15□□□□□ -0.95
SRP54-208ENST00000555557 LHX2P50458 406 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 NUDT6P53370 316 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 TOP3AQ13472 1001 aaPredicted RBP9.15□□□□□ -0.95
SRP54-208ENST00000555557 NADK2Q4G0N4 442 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 ZNF362Q5T0B9 420 aaPredicted RBP9.15□□□□□ -0.95
SRP54-208ENST00000555557 PLXDC2Q6UX71 529 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 OR8J1Q8NGP2 316 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 OR4K13Q8NH42 304 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 SGCDQ92629 289 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 OTULINQ96BN8 352 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 RASD2Q96D21 266 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 Q96M85 177 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 SLC38A2Q96QD8 506 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 NR1H4Q96RI1 486 aaPredicted RBP9.15□□□□□ -0.95
SRP54-208ENST00000555557 ARHGAP9Q9BRR9 750 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 RHNO1Q9BSD3 238 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 POLDIP3Q9BY77 421 aaKnown RBP9.15□□□□□ -0.95
SRP54-208ENST00000555557 SRXN1Q9BYN0 137 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 ACKR4Q9NPB9 350 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 CHST11Q9NPF2 352 aa9.15□□□□□ -0.95
SRP54-208ENST00000555557 DNAJC27Q9NZQ0 273 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms