RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 CLDN17P56750 224 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 SLC25A3Q00325 362 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 GABRA6Q16445 453 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 NCMAPQ5T1S8 102 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 SWT1Q5T5J6 900 aaKnown RBP12.02□□□□□ -0.49
SNX6-203ENST00000555416 HACD2Q6Y1H2 254 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 ZNF704Q6ZNC4 412 aaPredicted RBP12.02□□□□□ -0.49
SNX6-203ENST00000555416 PIGWQ7Z7B1 504 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 WDR31Q8NA23 367 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 OR52N5Q8NH56 324 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 CXXC4Q9H2H0 198 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 SLCO5A1Q9H2Y9 848 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 EVA1AQ9H8M9 152 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 EFCAB1Q9HAE3 211 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 PARPBPQ9NWS1 579 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 TAS2R16Q9NYV7 291 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 SELENONQ9NZV5 590 aa12.02□□□□□ -0.49
SNX6-203ENST00000555416 TRAF3IP2O43734 574 aaPredicted RBP12.01□□□□□ -0.49
SNX6-203ENST00000555416 OR2T1O43869 369 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 UPK3AO75631 287 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 ZNF432O94892 652 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 VAMP5O95183 116 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 BSPH1Q075Z2 132 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 FOXD4Q12950 439 aaPredicted RBP12.01□□□□□ -0.49
SNX6-203ENST00000555416 PIN1Q13526 163 aaPredicted RBP12.01□□□□□ -0.49
SNX6-203ENST00000555416 KEAP1Q14145 624 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 PPA1Q15181 289 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 ACKR1Q16570 336 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 TIMM23BQ5SRD1 257 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 NIPAL3Q6P499 406 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 C5orf46Q6UWT4 87 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 SPNS3Q6ZMD2 512 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 DEF8Q6ZN54 512 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 H1FNTQ75WM6 255 aaPredicted RBP12.01□□□□□ -0.49
SNX6-203ENST00000555416 VTCN1Q7Z7D3 282 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 NKAIN4Q8IVV8 208 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 LRRC17Q8N6Y2 441 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 OR6S1Q8NH40 331 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 PROX1Q92786 737 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 MBD6Q96DN6 1003 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 MUS81Q96NY9 551 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 OXGR1Q96P68 337 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 FOXC2Q99958 501 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 ZNF426Q9BUY5 554 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 C1QTNF6Q9BXI9 259 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 AMBRA1Q9C0C7 1298 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 NSRP1Q9H0G5 558 aaKnown RBP12.01□□□□□ -0.49
SNX6-203ENST00000555416 ARL8BQ9NVJ2 186 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 UPB1Q9UBR1 384 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 SNX13Q9Y5W8 968 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 SLC25A15Q9Y619 301 aa12.01□□□□□ -0.49
SNX6-203ENST00000555416 CIB4A0PJX0 185 aa12□□□□□ -0.49
SNX6-203ENST00000555416 KPNA4O00629 521 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 PLPP3O14495 311 aa12□□□□□ -0.49
SNX6-203ENST00000555416 NCK1P16333 377 aa12□□□□□ -0.49
SNX6-203ENST00000555416 ZNF43P17038 809 aa12□□□□□ -0.49
SNX6-203ENST00000555416 CDH2P19022 906 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 GTF2E2P29084 291 aaKnown RBP12□□□□□ -0.49
SNX6-203ENST00000555416 PRDX6P30041 224 aa12□□□□□ -0.49
SNX6-203ENST00000555416 UGT2B15P54855 530 aa12□□□□□ -0.49
SNX6-203ENST00000555416 PSME3P61289 254 aa12□□□□□ -0.49
SNX6-203ENST00000555416 LSM11P83369 360 aaKnown RBP eCLIP12□□□□□ -0.49
SNX6-203ENST00000555416 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
SNX6-203ENST00000555416 PHYHD1Q5SRE7 291 aa12□□□□□ -0.49
SNX6-203ENST00000555416 ARPINQ7Z6K5 226 aa12□□□□□ -0.49
SNX6-203ENST00000555416 KRTAP1-3Q8IUG1 177 aa12□□□□□ -0.49
SNX6-203ENST00000555416 C10orf53Q8N6V4 93 aa12□□□□□ -0.49
SNX6-203ENST00000555416 TMEM255BQ8WV15 326 aa12□□□□□ -0.49
SNX6-203ENST00000555416 RASSF5Q8WWW0 418 aa12□□□□□ -0.49
SNX6-203ENST00000555416 IGFBPL1Q8WX77 278 aa12□□□□□ -0.49
SNX6-203ENST00000555416 CMTM5Q96DZ9 223 aa12□□□□□ -0.49
SNX6-203ENST00000555416 ZNF837Q96EG3 531 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 TXNDC15Q96J42 360 aa12□□□□□ -0.49
SNX6-203ENST00000555416 TPD52L3Q96J77 140 aa12□□□□□ -0.49
SNX6-203ENST00000555416 ALKBH3Q96Q83 286 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 EPYCQ99645 322 aa12□□□□□ -0.49
SNX6-203ENST00000555416 HOPXQ9BPY8 73 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 MEPEQ9NQ76 525 aaPredicted RBP12□□□□□ -0.49
SNX6-203ENST00000555416 MRPL39Q9NYK5 338 aaKnown RBP12□□□□□ -0.49
SNX6-203ENST00000555416 ABCD2Q9UBJ2 740 aa12□□□□□ -0.49
SNX6-203ENST00000555416 BAG5Q9UL15 447 aa12□□□□□ -0.49
SNX6-203ENST00000555416 B3GALT5Q9Y2C3 310 aa12□□□□□ -0.49
SNX6-203ENST00000555416 LOC102725191A0A1B0GVB3 256 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 CXCR6O00574 342 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 CH25HO95992 272 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 MPGP29372 298 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 ZNF83P51522 516 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 NR1H2P55055 460 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 SELENOWP63302 87 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 SPOCK1Q08629 439 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 PMS2P3Q13401 168 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 ZNF74Q16587 644 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 HIKESHIQ53FT3 197 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 ADAM5Q6NVV9 412 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 SLC46A3Q7Z3Q1 461 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 TSEN54Q7Z6J9 526 aaKnown RBP11.99□□□□□ -0.49
SNX6-203ENST00000555416 TMEM123Q8N131 208 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 RNF148Q8N7C7 305 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 POMGNT2Q8NAT1 580 aa11.99□□□□□ -0.49
SNX6-203ENST00000555416 RBM15BQ8NDT2 890 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms