RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 KLHL24Q6TFL4 600 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 H1FNTQ75WM6 255 aaPredicted RBP10.38□□□□□ -0.75
VRK1-204ENST00000555351 FAM169BQ8N8A8 192 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 OR52N5Q8NH56 324 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 TAAR8Q969N4 342 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 SLC41A3Q96GZ6 507 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 POM121Q96HA1 1249 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 ALG2Q9H553 416 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 FKRPQ9H9S5 495 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 KLHL14Q9P2G3 628 aa10.38□□□□□ -0.75
VRK1-204ENST00000555351 ARID1AO14497 2285 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 IGKV1D-42A0A075B6H8 117 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 ARPC4-TTLL3A0A0A6YYG9 625 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 BBIP1A8MTZ0 92 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 H7C1Q1 480 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 M0QX08 132 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 SLC22A2O15244 555 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 KRT33AO76009 404 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 MT-ATP6P00846 226 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 ROS1P08922 2347 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 PCGF2P35227 344 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 ZNF83P51522 516 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 DMTNQ08495 405 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 MAPRE2Q15555 327 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 OR1Q1Q15612 314 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 GLIPR1L2Q4G1C9 344 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 PRR14LQ5THK1 2151 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 ANKRD16Q6P6B7 361 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 CLEC9AQ6UXN8 241 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 LINC00114Q6XXX2 140 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 CCDC80Q76M96 950 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 COMTD1Q86VU5 262 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 CCDC36Q8IYA8 594 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 OR8J3Q8NGG0 315 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 OR1K1Q8NGR3 316 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 SLC25A36Q96CQ1 311 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 ARHGDIGQ99819 225 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 DHRS9Q9BPW9 319 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 TMEM120AQ9BXJ8 343 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 PCDHAC1Q9H158 963 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 GSX1Q9H4S2 264 aaPredicted RBP10.37□□□□□ -0.75
VRK1-204ENST00000555351 CCDC134Q9H6E4 229 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 B3GAT1Q9P2W7 334 aa10.37□□□□□ -0.75
VRK1-204ENST00000555351 M0R082 166 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 CHP2O43745 196 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 TPST2O60704 377 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 SLC43A1O75387 559 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 CD8AP01732 235 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 BMP4P12644 408 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 AQP1P29972 269 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 GRPRP30550 384 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 TTKP33981 857 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 SELENOPP49908 381 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 ARFIP2P53365 341 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 MTPNP58546 118 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 C1DQ13901 141 aaKnown RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 VEZF1Q14119 521 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 DUSP7Q16829 419 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 VMACQ2NL98 169 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 C11orf71Q6IPW1 123 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 NANOGP8Q6NSW7 305 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 HMBOX1Q6NT76 420 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 NIPAL3Q6P499 406 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 SLC22A25Q6T423 547 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 DNM1P46Q6ZS02 220 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 FBXL14Q8N1E6 418 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 PIK3C3Q8NEB9 887 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 ZNF417Q8TAU3 575 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 BCL2L2Q92843 193 aaPredicted RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 NEUROG1Q92886 237 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 THOC1Q96FV9 657 aaKnown RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 MPP4Q96JB8 637 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 LRR1Q96L50 414 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 ZNF587Q96SQ5 575 aaPredicted RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 ASPNQ9BXN1 380 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 SLC19A3Q9BZV2 496 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 POLR2J2Q9GZM3 115 aaKnown RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 POLR2J3Q9H1A7 115 aaKnown RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 NANOGQ9H9S0 305 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 CBLN4Q9NTU7 201 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 MRPL39Q9NYK5 338 aaKnown RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 CRNNQ9UBG3 495 aaPredicted RBP10.36□□□□□ -0.75
VRK1-204ENST00000555351 NOX1Q9Y5S8 564 aa10.36□□□□□ -0.75
VRK1-204ENST00000555351 NIPBLQ6KC79 2804 aaeCLIP10.35□□□□□ -0.75
VRK1-204ENST00000555351 E7EQL1 145 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 H7C417 338 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 M0R1B8 84 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 FBP2O00757 339 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 TRAF3IP2O43734 574 aaPredicted RBP10.35□□□□□ -0.75
VRK1-204ENST00000555351 BGLAPP02818 100 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 GZMMP51124 257 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 CDH12P55289 794 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 CLDN17P56750 224 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 SLC25A3Q00325 362 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 LTBQ06643 244 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 SELPLGQ14242 412 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 TBRG1Q3YBR2 411 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 C9orf135Q5VTT2 229 aa10.35□□□□□ -0.75
VRK1-204ENST00000555351 ERICH5Q6P6B1 374 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms