RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 IFT27Q9BW83 186 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 FKRPQ9H9S5 495 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 ACKR4Q9NPB9 350 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 SERINC1Q9NRX5 453 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 TAS2R5Q9NYW4 299 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 ZNF229Q9UJW7 825 aa9.65□□□□□ -0.86
TDP1-211ENST00000555178 MRPS18CQ9Y3D5 142 aaKnown RBP9.65□□□□□ -0.86
TDP1-211ENST00000555178 TRGV5A0A0B4J1U4 118 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 A0A1B0GTH9 108 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 IGF2P01344 180 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 HLA-DOBP13765 273 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 FMO3P31513 532 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 DIO1P49895 249 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.64□□□□□ -0.87
TDP1-211ENST00000555178 PGGHGQ32M88 737 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 KRT80Q6KB66 452 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 GHDCQ8N2G8 530 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 LIPHQ8WWY8 451 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 SGCDQ92629 289 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OSTF1Q92882 214 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 ADGRG7Q96K78 797 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 UCN2Q96RP3 112 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 TIMP4Q99727 224 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 HIF3AQ9Y2N7 669 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 PHF3Q92576 2039 aaKnown RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 EIF1AYO14602 144 aaKnown RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 WBP4O75554 376 aaKnown RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 IGHG3P01860 377 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 POU3F2P20265 443 aaPredicted RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 AHCYP23526 432 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 RPL4P36578 427 aaKnown RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 TDGF1P3P51864 188 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OR2B6P58173 313 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 ERVK-25P63136 954 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 TOP3AQ13472 1001 aaPredicted RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 MAD2L1BPQ15013 274 aaPredicted RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 VASNQ6EMK4 673 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 MAMDC2Q7Z304 686 aaPredicted RBP9.64□□□□□ -0.87
TDP1-211ENST00000555178 THAP5Q7Z6K1 395 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 CLDN22Q8N7P3 220 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 TMEM99Q8N816 258 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 TCEANCQ8N8B7 351 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 LRRC75AQ8NAA5 344 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OR2T33Q8NG76 320 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OR52L1Q8NGH7 329 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OR5M9Q8NGP3 310 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 OR5J2Q8NH18 312 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 RASD2Q96D21 266 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 KATNB1Q9BVA0 655 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 LDAHQ9H6V9 325 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 SLC25A19Q9HC21 320 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 ENOPH1Q9UHY7 261 aa9.64□□□□□ -0.87
TDP1-211ENST00000555178 NPIPA2E9PIF3 369 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 NPIPA3F8WFD2 350 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ERVH48-1M5A8F1 160 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ACOT7O00154 380 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 CXCL13O43927 109 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 NDUFB2O95178 105 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 RCBTB2O95199 551 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 MT-ATP6P00846 226 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 PRB1P04280 392 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 TSPAN19P0C672 248 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ADORA3P0DMS8 318 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 GABRB1P18505 474 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ENPP1P22413 925 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SMSP52788 366 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 NUDT6P53370 316 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 CDC42P60953 191 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 RAC1P63000 192 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 NFATC3Q12968 1075 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ALG10Q5BKT4 473 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 EMC4Q5J8M3 183 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ZNF786Q8N393 782 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 FAM98AQ8NCA5 519 aaKnown RBP9.63□□□□□ -0.87
TDP1-211ENST00000555178 MFSD8Q8NHS3 518 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ZPLD1Q8TCW7 415 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SLC25A43Q8WUT9 341 aaPredicted RBP9.63□□□□□ -0.87
TDP1-211ENST00000555178 ABTB1Q969K4 478 aaPredicted RBP9.63□□□□□ -0.87
TDP1-211ENST00000555178 WDYHV1Q96HA8 205 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 KLHL15Q96M94 604 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 POTEKPQ9BYX7 375 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 EXO5Q9H790 373 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 PLSCR2Q9NRY7 297 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 IMPAD1Q9NX62 359 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 IER3IP1Q9Y5U9 82 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SPIN1Q9Y657 262 aaPredicted RBP9.63□□□□□ -0.87
TDP1-211ENST00000555178 FAM183AA6NL82 134 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 MS4A18H0YCH9 400 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SULT2B1O00204 365 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 PLPP3O14495 311 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SURF4O15260 269 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 OR2T1O43869 369 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 XPNPEP2O43895 674 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 ZNF708P17019 499 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SLC6A6P31641 620 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 P2RY4P51582 365 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 NUP107P57740 925 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 CDK5R2Q13319 367 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 PMS2P3Q13401 168 aa9.63□□□□□ -0.87
TDP1-211ENST00000555178 SNAPC1Q16533 368 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms