RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SDHAP31040 664 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 FOLR3P41439 243 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 HTR3AP46098 478 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 CCR4P51679 360 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SNTA1Q13424 505 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 GALEQ14376 348 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MOGQ16653 247 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 ZNF684Q5T5D7 378 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SSX6Q7RTT6 188 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MFSD4AQ8N468 514 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SDR9C7Q8NEX9 313 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SLC22A8Q8TCC7 542 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 RASD2Q96D21 266 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 DEPDC7Q96QD5 511 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 SECISBP2Q96T21 854 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 CDC6Q99741 560 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 KATNB1Q9BVA0 655 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 MARCH7Q9H992 704 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 STUB1Q9UNE7 303 aa8.05□□□□□ -1.12
TDP1-210ENST00000554976 TMA7Q9Y2S6 64 aaKnown RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 CAB39Q9Y376 341 aaPredicted RBP8.05□□□□□ -1.12
TDP1-210ENST00000554976 C2orf72A6NCS6 295 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 RIIAD1A6NNX1 92 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 A8MVM7 634 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 C9J4A7 227 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 MASP2O00187 686 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ZNF208O43345 1280 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 MT-CO3P00414 261 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 CD14P08571 375 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 CD63P08962 238 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 GP1BBP13224 206 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 F8A1P23610 371 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 P2RY4P51582 365 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 RPS18P62269 152 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 LSM3P62310 102 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 SPEM2Q0P670 501 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 SGCBQ16585 318 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ZNF829Q3KNS6 432 aaPredicted RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 SLC35D3Q5M8T2 416 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 GDPGP1Q6ZNW5 385 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 USP43Q70EL4 1123 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ZNF227Q86WZ6 799 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 OR52E2Q8NGJ4 325 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 GATAD2BQ8WXI9 593 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 PLEKHA8Q96JA3 519 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 SNX18Q96RF0 628 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 DCLRE1CQ96SD1 692 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 STRADBQ9C0K7 418 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 SIRT4Q9Y6E7 314 aaPredicted RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 A3GALT2U3KPV4 340 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 CCDC187A0A096LP49 1063 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 MYL12BO14950 172 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 LRP3O75074 770 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 HPP00738 406 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 PSKH1P11801 424 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 SPI1P17947 270 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 MSX1P28360 303 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 RPS25P62851 125 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 ERVK-25P63136 954 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ZP4Q12836 540 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 INPP5JQ15735 1006 aaPredicted RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 KCNJ8Q15842 424 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 BTBD16Q32M84 506 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 C1orf140Q5VVS0 124 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 C5orf46Q6UWT4 87 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 DND1Q8IYX4 353 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 CYB561A3Q8NBI2 242 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 OR51G2Q8NGK0 314 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 OR6Q1Q8NGQ2 317 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 OR4K13Q8NH42 304 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 PAQR8Q8TEZ7 354 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 SPRYD4Q8WW59 207 aaPredicted RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 NMNAT3Q96T66 252 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 CDADC1Q9BWV3 514 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ANGPTL4Q9BY76 406 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 DCSTAMPQ9H295 470 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 NANSQ9NR45 359 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 MRPL39Q9NYK5 338 aaKnown RBP8.04□□□□□ -1.12
TDP1-210ENST00000554976 MED11Q9P086 117 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 TNFRSF10DQ9UBN6 386 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 CORINQ9Y5Q5 1042 aa8.04□□□□□ -1.12
TDP1-210ENST00000554976 ZDBF2Q9HCK1 2354 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 TEX13CA0A0J9YWL9 993 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PLPP3O14495 311 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 GMFGO60234 142 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SC5DO75845 299 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 PRKACBP22694 351 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 APOBEC1P41238 236 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 DIO1P49895 249 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 POU4F2Q12837 409 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 FOXF1Q12946 379 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SSPNQ14714 243 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 ZNF239Q16600 458 aaKnown RBP8.03□□□□□ -1.12
TDP1-210ENST00000554976 ALG10Q5BKT4 473 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 FAM69AQ5T7M9 428 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 LHFPL3Q86UP9 236 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 LILRB4Q8NHJ6 448 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 SMPDL3BQ92485 455 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 Q96M85 177 aa8.03□□□□□ -1.12
TDP1-210ENST00000554976 BARHL1Q9BZE3 327 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms