RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 RAD51DO75771 328 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 TNFRSF1BP20333 461 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 HOXC12P31275 282 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 TMEM225Q6GV28 225 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 H1FNTQ75WM6 255 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-227ENST00000553256 AAED1Q7RTV5 226 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 GPAT4Q86UL3 456 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 MICU2Q8IYU8 434 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 SCAIQ8N9R8 606 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 C1orf162Q8NEQ5 155 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-227ENST00000553256 OR2T12Q8NG77 320 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 RASSF5Q8WWW0 418 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 OXGR1Q96P68 337 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 NELFAQ9H3P2 528 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 BEX4Q9NWD9 120 aaPredicted RBP16.93■□□□□ 0.3
PTCH1-227ENST00000553256 SLC13A4Q9UKG4 626 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 RCE1Q9Y256 329 aa16.93■□□□□ 0.3
PTCH1-227ENST00000553256 ZFHX3Q15911 3703 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 FLNAP21333 2647 aaKnown RBP16.92■□□□□ 0.3
PTCH1-227ENST00000553256 MED13LQ71F56 2210 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 TRAPPC13A5PLN9 417 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 CPSF4LA6NMK7 179 aaKnown RBP16.92■□□□□ 0.3
PTCH1-227ENST00000553256 AIM2O14862 343 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 UPK3AO75631 287 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 FUT4P22083 530 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 MPGP29372 298 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 NCALDP61601 193 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 KEAP1Q14145 624 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 PPA1Q15181 289 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 C20orf204Q6ZNR8 217 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 SSX8Q7RTT4 187 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 TMEM123Q8N131 208 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 UBE2J2Q8N2K1 259 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 POMGNT2Q8NAT1 580 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 VANGL1Q8TAA9 524 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-227ENST00000553256 HOPXQ9BPY8 73 aaPredicted RBP16.92■□□□□ 0.3
PTCH1-227ENST00000553256 TMUB1Q9BVT8 246 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 LINC00470Q9BZP3 86 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 MRPL39Q9NYK5 338 aaKnown RBP16.92■□□□□ 0.3
PTCH1-227ENST00000553256 EDARQ9UNE0 448 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 CORINQ9Y5Q5 1042 aa16.92■□□□□ 0.3
PTCH1-227ENST00000553256 ELOVL7A1L3X0 281 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 RPL36A-HNRNPH2H7BZ11 118 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 HLA-DOBP13765 273 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 PAX1P15863 534 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 PTNP21246 168 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 PRDX6P30041 224 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 SLC7A2P52569 658 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 LIPEQ05469 1076 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 BSPH1Q075Z2 132 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 MFSD13AQ14CX5 517 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 ZNF74Q16587 644 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 CYBRD1Q53TN4 286 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 ARPINQ7Z6K5 226 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 CARM1Q86X55 608 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 C17orf78Q8N4C9 275 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 ZNF611Q8N823 705 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 NEUROG1Q92886 237 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 MPP4Q96JB8 637 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 EPYCQ99645 322 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 EFCAB1Q9HAE3 211 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 MEPEQ9NQ76 525 aaPredicted RBP16.91■□□□□ 0.3
PTCH1-227ENST00000553256 DLL4Q9NR61 685 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 SLC17A5Q9NRA2 495 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 AP3M1Q9Y2T2 418 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 PLCE1Q9P212 2302 aa16.91■□□□□ 0.3
PTCH1-227ENST00000553256 SHISA9B4DS77 424 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 PLPP3O14495 311 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 HS3ST1O14792 307 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 DANCRP0C864 163 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 GSK3BP49841 420 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 SELENOWP63302 87 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 ADAM8P78325 824 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 STK11Q15831 433 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 FXNQ16595 210 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 C1QTNF12Q5T7M4 302 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 OR7E24Q6IFN5 339 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 SLC46A3Q7Z3Q1 461 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 TSEN54Q7Z6J9 526 aaKnown RBP16.9■□□□□ 0.3
PTCH1-227ENST00000553256 OR2M2Q96R28 347 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 SLC19A3Q9BZV2 496 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 POLR2J2Q9GZM3 115 aaKnown RBP16.9■□□□□ 0.3
PTCH1-227ENST00000553256 POLR2J3Q9H1A7 115 aaKnown RBP16.9■□□□□ 0.3
PTCH1-227ENST00000553256 UBTD1Q9HAC8 227 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 BAG5Q9UL15 447 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 SLC7A7Q9UM01 511 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 SH3GLB1Q9Y371 365 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 RNF115Q9Y4L5 304 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 ARID1AO14497 2285 aa16.9■□□□□ 0.3
PTCH1-227ENST00000553256 DSCAMO60469 2012 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 MT-ATP6P00846 226 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 IGF2P01344 180 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 TSPAN19P0C672 248 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 ASAH2BP0C7U1 165 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 OR1E2P47887 323 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 CLDN17P56750 224 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 PHYHD1Q5SRE7 291 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 NIPAL3Q6P499 406 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 TGIF2LYQ8IUE0 185 aa16.89■□□□□ 0.29
PTCH1-227ENST00000553256 NKAIN4Q8IVV8 208 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms