RNA–Protein interactions for RNA: ENST00000552433.1

LETMD1-233, Transcript of LETM1 domain containing 1, human

TSL 2

Gene LETMD1, Length 727 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-233	ENST00000552433	HLCS	P50747	726 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	CLCN3	P51790	818 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	KPNA2	P52292	529 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	DGKQ	P52824	942 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	OR4D2	P58180	307 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	RPL15	P61313	204 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	NAA20	P61599	178 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	RPL19	P84098	196 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	HSF1	Q00613	529 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	SRSF1	Q07955	248 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	ITGA9	Q13797	1035 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	KRT33B	Q14525	404 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GANAB	Q14697	944 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	MEP1A	Q16819	746 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	TMEM176B	Q3YBM2	270 aa	Predicted RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GLYR1	Q49A26	553 aa	Predicted RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	TNFAIP8L3	Q5GJ75	292 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	IDNK	Q5T6J7	187 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	SERTAD4-AS1	Q5TG53	156 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	ACSM6	Q6P461	480 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	RBMS3	Q6XE24	437 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	HACD2	Q6Y1H2	254 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	CDHR3	Q6ZTQ4	885 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	MEPCE	Q7L2J0	689 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	RANBP3L	Q86VV4	465 aa	Predicted RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	SERPINA9	Q86WD7	417 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GPBP1	Q86WP2	473 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	TRAPPC5	Q8IUR0	188 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	PARP8	Q8N3A8	854 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	STPG2	Q8N412	459 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	TMEM163	Q8TC26	289 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	PTH2	Q96A98	100 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	OTULIN	Q96BN8	352 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	C12orf43	Q96C57	262 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	DCPS	Q96C86	337 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	FBXO17	Q96EF6	278 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	SMIM12	Q96EX1	92 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	OTUB1	Q96FW1	271 aa	Predicted RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	JSRP1	Q96MG2	331 aa	Predicted RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	ZFP3	Q96NJ6	502 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	TNFRSF13C	Q96RJ3	184 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	MYADM	Q96S97	322 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	RNF2	Q99496	336 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	FEV	Q99581	238 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	MRPS26	Q9BYN8	205 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	FAM234A	Q9H0X4	552 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	DDX31	Q9H8H2	851 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	FZD3	Q9NPG1	666 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	CUTC	Q9NTM9	273 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	C1orf109	Q9NX04	203 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GPR83	Q9NYM4	423 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	PAK5	Q9P286	719 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	CLN8	Q9UBY8	286 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	KL	Q9UEF7	1012 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GLS2	Q9UI32	602 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	KIF25	Q9UIL4	384 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	NXT1	Q9UKK6	140 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	ICAM5	Q9UMF0	924 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	PRPF19	Q9UMS4	504 aa	Known RBP	5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	QSER1	Q2KHR3	1735 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	PLEKHH1	Q9ULM0	1364 aa		5.67	□□□□□ -1.5
LETMD1-233	ENST00000552433	GOLGB1	Q14789	3259 aa	Known RBP	5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	NAIP	Q13075	1403 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	C2CD4B	A6NLJ0	364 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CCT8L1P	A6NM43	557 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	EFCAB7	A8K855	629 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	TSTD3	H0UI37	97 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433		H0YGN5	161 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	NKX2-8	O15522	239 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	OR1F1	O43749	312 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	KIAA0513	O60268	411 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	AQP8	O94778	261 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	SOX30	O94993	753 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	SCEL	O95171	688 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	ACTL6A	O96019	429 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	PLAU	P00749	431 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CDK1	P06493	297 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	RAB40AL	P0C0E4	278 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	ANKRD34C	P0C6C1	535 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	GABRR1	P24046	479 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	SSTR2	P30874	369 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CALCR	P30988	508 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	COIL	P38432	576 aa	Predicted RBP	5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CEACAM6	P40199	344 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	SLC6A8	P48029	635 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CCL11	P51671	97 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	ACLY	P53396	1101 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	PLA2G16	P53816	162 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	TAS2R39	P59534	338 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	PLP1	P60201	277 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	NANOS2	P60321	138 aa	Known RBP	5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	ASAH1	Q13510	395 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	PSG5	Q15238	335 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	CCDC6	Q16204	474 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	TNXA	Q16473	311 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	HIST2H2AC	Q16777	129 aa	Predicted RBP	5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	NDUFA9	Q16795	377 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	KNOP1	Q1ED39	458 aa	Known RBP	5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	COL28A1	Q2UY09	1125 aa		5.66	□□□□□ -1.5
LETMD1-233	ENST00000552433	ZNF658B	Q4V348	819 aa	Predicted RBP	5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms