RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 SAMD4AQ9UPU9 718 aaKnown RBP16.34■□□□□ 0.21
PRPF40B-216ENST00000552301 CIB4A0PJX0 185 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 LYPD3O95274 346 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 UMPSP11172 480 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 CRYGSP22914 178 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 IGHV1-2P23083 117 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 RBM34P42696 430 aaKnown RBP16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 KRTAP10-9P60411 292 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 FAPQ12884 760 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 TSC22D1Q15714 1073 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 SPATS1Q496A3 300 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 ALKBH2Q6NS38 261 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 CREB3L2Q70SY1 520 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 ABHD12BQ7Z5M8 362 aaPredicted RBP16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 CYP4Z1Q86W10 505 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 KDM8Q8N371 416 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 POMGNT2Q8NAT1 580 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 HS6ST2Q96MM7 605 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 MOGAT1Q96PD6 335 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 FNDC11Q9BVV2 318 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 SLCO5A1Q9H2Y9 848 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 NANSQ9NR45 359 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 MALT1Q9UDY8 824 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 ITPR2Q14571 2701 aa16.33■□□□□ 0.2
PRPF40B-216ENST00000552301 OR6C65A6NJZ3 312 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 LRRN3E7EW58 273 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 CH25HO95992 272 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 HIST1H2ABP04908 130 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 COX5AP20674 150 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 DNAJA1P31689 397 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 CLDN17P56750 224 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 PUDPQ08623 228 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 STK11Q15831 433 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF74Q16587 644 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 NIPAL3Q6P499 406 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 HIST3H2AQ7L7L0 130 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 EPHX4Q8IUS5 362 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 ZIC4Q8N9L1 334 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 RBM15BQ8NDT2 890 aaKnown RBP16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 OR5J2Q8NH18 312 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 HIST1H2ACQ93077 130 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 NSMCE2Q96MF7 247 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 PRSS27Q9BQR3 290 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF426Q9BUY5 554 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 AMBRA1Q9C0C7 1298 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 FKRPQ9H9S5 495 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 TAS2R16Q9NYV7 291 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 RCE1Q9Y256 329 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 MED31Q9Y3C7 131 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 SNX13Q9Y5W8 968 aa16.32■□□□□ 0.2
PRPF40B-216ENST00000552301 ENO4A6NNW6 628 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 RAD51DO75771 328 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 HRGP04196 525 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 ADORA3P0DMS8 318 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 AHCYP23526 432 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 NTF4P34130 210 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 YAP1P46937 504 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 TGFBR3Q03167 851 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 LTBQ06643 244 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 BEX5Q5H9J7 111 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 TSPO2Q5TGU0 170 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 TRPM8Q7Z2W7 1104 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 NANOGNBQ7Z5D8 188 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 CDC20BQ86Y33 519 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 LURAP1LQ8IV03 231 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 NKAIN4Q8IVV8 208 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 OFCC1Q8IZS5 231 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 TMEM255BQ8WV15 326 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 TMEM239Q8WW34 195 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 HSD17B8Q92506 261 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 MUCL1Q96DR8 90 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 PIK3IP1Q96FE7 263 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 GORASP2Q9H8Y8 452 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 NGBQ9NPG2 151 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 SLC7A10Q9NS82 523 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 DCAF13Q9NV06 445 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 B3GAT1Q9P2W7 334 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF229Q9UJW7 825 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 A4GNTQ9UNA3 340 aa16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 FAM32AQ9Y421 112 aaKnown RBP16.31■□□□□ 0.2
PRPF40B-216ENST00000552301 LOC102725191A0A1B0GVB3 256 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 FAM221AA4D161 298 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF587BE7ETH6 402 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 ARPC2O15144 300 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 SLC43A1O75387 559 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 SERPINI2O75830 405 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 MT-ND1P03886 318 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 THBDP07204 575 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 HOXC12P31275 282 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 SELENOPP49908 381 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 UGT2B15P54855 530 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 POU3F1Q03052 451 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 TRAM2Q15035 370 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 SSX8Q7RTT4 187 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 CDH24Q86UP0 819 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 ARHGAP24Q8N264 748 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 ZNF433Q8N7K0 673 aaPredicted RBP16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 SGTBQ96EQ0 304 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 CD300AQ9UGN4 299 aa16.3■□□□□ 0.2
PRPF40B-216ENST00000552301 EDARQ9UNE0 448 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms