RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 MRPL39Q9NYK5 338 aaKnown RBP15.35■□□□□ 0.05
CDK4-208ENST00000551706 CRIM1Q9NZV1 1036 aa15.35■□□□□ 0.05
CDK4-208ENST00000551706 A4GNTQ9UNA3 340 aa15.35■□□□□ 0.05
CDK4-208ENST00000551706 GPR52Q9Y2T5 361 aa15.35■□□□□ 0.05
CDK4-208ENST00000551706 LOC102725191A0A1B0GVB3 256 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 M0R082 166 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 ARPC2O15144 300 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 IGF2P01344 180 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 BGLAPP02818 100 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 EPXP11678 715 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 PPP3CBP16298 524 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 PSMB1P20618 241 aaKnown RBP15.34■□□□□ 0.05
CDK4-208ENST00000551706 SNTB1Q13884 538 aaKnown RBP15.34■□□□□ 0.05
CDK4-208ENST00000551706 CASP12Q6UXS9 341 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 CYP4Z1Q86W10 505 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 OFCC1Q8IZS5 231 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 ZNF417Q8TAU3 575 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 NANOS1Q8WY41 292 aaKnown RBP15.34■□□□□ 0.05
CDK4-208ENST00000551706 OXGR1Q96P68 337 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 ZNF587Q96SQ5 575 aaPredicted RBP15.34■□□□□ 0.05
CDK4-208ENST00000551706 USB1Q9BQ65 265 aaKnown RBP15.34■□□□□ 0.05
CDK4-208ENST00000551706 MUC13Q9H3R2 512 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 FKRPQ9H9S5 495 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 TAS2R1Q9NYW7 299 aa15.34■□□□□ 0.05
CDK4-208ENST00000551706 SH3D21A4FU49 640 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 HTR3EA5X5Y0 456 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 UBOX5O94941 541 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 GOSR1O95249 250 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 NQO1P15559 274 aaKnown RBP15.33■□□□□ 0.04
CDK4-208ENST00000551706 ZNF43P17038 809 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 CCKARP32238 428 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 MSX2P35548 267 aaPredicted RBP15.33■□□□□ 0.04
CDK4-208ENST00000551706 FBXW9Q5XUX1 488 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 STAC2Q6ZMT1 411 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 CREB3L2Q70SY1 520 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 STEAP2Q8NFT2 490 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 LINC01560Q8TB33 94 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 TMEM239Q8WW34 195 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 PYURFQ96I23 114 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 MOGAT1Q96PD6 335 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 FNDC11Q9BVV2 318 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 NANSQ9NR45 359 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 ACTR3BQ9P1U1 418 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 MED31Q9Y3C7 131 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 FAM32AQ9Y421 112 aaKnown RBP15.33■□□□□ 0.04
CDK4-208ENST00000551706 ENPP4Q9Y6X5 453 aa15.33■□□□□ 0.04
CDK4-208ENST00000551706 PRRC2AP48634 2157 aaKnown RBP15.33■□□□□ 0.04
CDK4-208ENST00000551706 CASKO14936 926 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 MT-ND1P03886 318 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 PTNP21246 168 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 CBLP22681 906 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 DNAJA1P31689 397 aaKnown RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 IST1P53990 364 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 LTBQ06643 244 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 ITGADQ13349 1161 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 PMS2P3Q13401 168 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 C1DQ13901 141 aaKnown RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 TRAM2Q15035 370 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 DAZAP2Q15038 168 aaPredicted RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 ZNF74Q16587 644 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 DNAL1Q4LDG9 190 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 MTX3Q5HYI7 312 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 SFRP5Q5T4F7 317 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 AAED1Q7RTV5 226 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 CXorf67Q86X51 503 aaPredicted RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 NKAIN4Q8IVV8 208 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 UBE2J2Q8N2K1 259 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 OR5J2Q8NH18 312 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 POP5Q969H6 163 aaKnown RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 ZNF385AQ96PM9 386 aaKnown RBP15.32■□□□□ 0.04
CDK4-208ENST00000551706 FOXC2Q99958 501 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 MED18Q9BUE0 208 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 CXXC4Q9H2H0 198 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 ZNF226Q9NYT6 803 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 PRSS50Q9UI38 385 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 ZNF229Q9UJW7 825 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 TESMINQ9Y4I5 508 aa15.32■□□□□ 0.04
CDK4-208ENST00000551706 OR6C65A6NJZ3 312 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 KPNA4O00629 521 aaPredicted RBP15.31■□□□□ 0.04
CDK4-208ENST00000551706 GYG2O15488 501 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 AKAP8O43823 692 aaKnown RBP15.31■□□□□ 0.04
CDK4-208ENST00000551706 OR6A2O95222 327 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 CH25HO95992 272 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 ADAP00813 363 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 HIST1H2ABP04908 130 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 ITGA2P17301 1181 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 RHCEP18577 417 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 IL32P24001 234 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 NTF4P34130 210 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 YAP1P46937 504 aaKnown RBP15.31■□□□□ 0.04
CDK4-208ENST00000551706 IL1RL1Q01638 556 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 PUDPQ08623 228 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 HIST3H2AQ7L7L0 130 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 EPHX4Q8IUS5 362 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 UEVLDQ8IX04 471 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 POMGNT2Q8NAT1 580 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 TMEM255BQ8WV15 326 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 HIST1H2ACQ93077 130 aa15.31■□□□□ 0.04
CDK4-208ENST00000551706 KISS1RQ969F8 398 aaPredicted RBP15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms