RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 RAD1O60671 282 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 CDK4P11802 303 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 AHCYP23526 432 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 ATP1A4Q13733 1029 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 MESTQ5EB52 335 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 MAMDC2Q7Z304 686 aaPredicted RBP17.78■□□□□ 0.44
SSH1-209ENST00000551165 PSD4Q8NDX1 1056 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 ZNF417Q8TAU3 575 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 ZFAND2BQ8WV99 257 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 ZNF587Q96SQ5 575 aaPredicted RBP17.78■□□□□ 0.44
SSH1-209ENST00000551165 ARHGAP9Q9BRR9 750 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 NMNAT2Q9BZQ4 307 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 TMEM185BQ9H7F4 350 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 SDHAF3Q9NRP4 125 aa17.78■□□□□ 0.44
SSH1-209ENST00000551165 RIF1Q5UIP0 2472 aaKnown RBP17.78■□□□□ 0.44
SSH1-209ENST00000551165 DCTN6O00399 190 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 HPP00738 406 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 SPI1P17947 270 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 SDHAP31040 664 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 PYCR1P32322 319 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 HTR3AP46098 478 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 ZNF41P51814 821 aaPredicted RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 SSX6Q7RTT6 188 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 ACBD7Q8N6N7 88 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 STK35Q8TDR2 534 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 SMPDL3BQ92485 455 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 ZHX1-C8orf76Q96EF9 292 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 UBL7Q96S82 380 aaPredicted RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 DCSTAMPQ9H295 470 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 RERGLQ9H628 205 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 SH2D2AQ9NP31 389 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 RPRD1BQ9NQG5 326 aaKnown RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 DOCK10Q96BY6 2186 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 F10P00742 488 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 TFP02787 698 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 APOBEC1P41238 236 aaKnown RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 FADS6Q8N9I5 356 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 OR5J2Q8NH18 312 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 PSMF1Q92530 271 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 GNRHR2Q96P88 292 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 COL25A1Q9BXS0 654 aaPredicted RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 CCDC86Q9H6F5 360 aaKnown RBP17.77■□□□□ 0.44
SSH1-209ENST00000551165 NDUFB11Q9NX14 153 aa17.77■□□□□ 0.44
SSH1-209ENST00000551165 CNOT1A5YKK6 2376 aaKnown RBP17.77■□□□□ 0.43
SSH1-209ENST00000551165 ETV2O00321 342 aaPredicted RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 MAGEB4O15481 346 aaPredicted RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 LRP3O75074 770 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 AHSA1O95433 338 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 IMPDH2P12268 514 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 HLA-DOBP13765 273 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 MSX1P28360 303 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 NAA10P41227 235 aaPredicted RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 CRYBB2P43320 205 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 ROR2Q01974 943 aaKnown RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 GLYR1Q49A26 553 aaPredicted RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 ZNF322Q6U7Q0 402 aaPredicted RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 ARMC10Q8N2F6 343 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 PAQR8Q8TEZ7 354 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 SLC39A7Q92504 469 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 C1GALT1C1Q96EU7 318 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 FRMD6Q96NE9 622 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 CPNE5Q9HCH3 593 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 HPF1Q9NWY4 346 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 GRHPRQ9UBQ7 328 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 RNF13O43567 381 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 IDH3BO43837 385 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 DXOO77932 396 aaKnown RBP17.76■□□□□ 0.43
SSH1-209ENST00000551165 MT-ATP6P00846 226 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 CPEP16870 476 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 DLX5P56178 289 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 ZNF85Q03923 595 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 TGIF1Q15583 401 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 OR7A5Q15622 319 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 SGCBQ16585 318 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 KLBQ86Z14 1044 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 KLHL36Q8N4N3 616 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 OR4K17Q8NGC6 315 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 ALG8Q9BVK2 526 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 JAM3Q9BX67 310 aa17.76■□□□□ 0.43
SSH1-209ENST00000551165 A0A0G2JMM0 328 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 A0A1W2PPB8 328 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 A0A1W2PQL4 384 aaPredicted RBP17.75■□□□□ 0.43
SSH1-209ENST00000551165 A0A1W2PRS3 328 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 DAPL1A0PJW8 107 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 KIR3DP1A8MWS1 328 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 PLPP3O14495 311 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 TFPIP10646 304 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 SHC1P29353 583 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 ENTPD1P49961 510 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 RPS25P62851 125 aaKnown RBP17.75■□□□□ 0.43
SSH1-209ENST00000551165 CHAF1BQ13112 559 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 KRR1Q13601 381 aaKnown RBP17.75■□□□□ 0.43
SSH1-209ENST00000551165 EXD3Q8N9H8 876 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 OR6K6Q8NGW6 343 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 TM9SF2Q99805 663 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 ANGPTL4Q9BY76 406 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 SRA1Q9HD15 236 aaKnown RBP17.75■□□□□ 0.43
SSH1-209ENST00000551165 EXOSC4Q9NPD3 245 aaKnown RBP17.75■□□□□ 0.43
SSH1-209ENST00000551165 HAO2Q9NYQ3 351 aa17.75■□□□□ 0.43
SSH1-209ENST00000551165 RPH3AQ9Y2J0 694 aaPredicted RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms