RNA–Protein interactions for RNA: ENST00000551009.5

ATP2B1-208, Transcript of ATPase plasma membrane Ca2+ transporting 1, humanhuman

TSL 3

Gene ATP2B1, Length 943 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1-208ENST00000551009 PPP1R3AQ16821 1122 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 SLC22A6Q4U2R8 563 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 PAN3Q58A45 887 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 C1orf220Q5T0J3 134 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 OR4C11Q6IEV9 310 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 ACSM5Q6NUN0 579 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 SASS6Q6UVJ0 657 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 LRRC31Q6UY01 552 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 PLEKHG7Q6ZR37 379 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 SLC35D2Q76EJ3 337 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 APTXQ7Z2E3 356 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 DCXRQ7Z4W1 244 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 ABHD12BQ7Z5M8 362 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 CATSPERDQ86XM0 798 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 RNF130Q86XS8 419 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 NELFCDQ8IXH7 590 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 TCEANCQ8N8B7 351 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 ZSCAN4Q8NAM6 433 aaPredicted RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 SLC37A3Q8NCC5 494 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 OR10H4Q8NGA5 316 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 OR4D6Q8NGJ1 314 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 UBA3Q8TBC4 463 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 GTF2H4Q92759 462 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 STMN2Q93045 179 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 TADA1Q96BN2 335 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 CXorf40BQ96DE9 158 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 FAM122AQ96E09 287 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 OMA1Q96E52 524 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 NEDD4LQ96PU5 975 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 CNN2Q99439 309 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 LPAR4Q99677 370 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 NIPSNAP3BQ9BS92 247 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 CNPY3Q9BT09 278 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 APOOQ9BUR5 198 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 RAB34Q9BZG1 259 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 RACGAP1Q9H0H5 632 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 SLC38A10Q9HBR0 1119 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 POPDC2Q9HBU9 364 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 DCAF13Q9NV06 445 aaKnown RBP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 MS4A12Q9NXJ0 267 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 NUDT4Q9NZJ9 180 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 ZNF229Q9UJW7 825 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 PUS1Q9Y606 427 aaKnown RBP eCLIP3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 GRIN2BQ13224 1484 aa3.78□□□□□ -1.8
ATP2B1-208ENST00000551009 PCF11O94913 1555 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 GRIN2DO15399 1336 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 A0A087WZ39 114 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 A0A1W2PPV9 198 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ZNF99A8MXY4 864 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 G3V4G9 280 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 RNASEK-C17orf49H0YIS7 233 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 CYB561D2O14569 222 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 RFXANKO14593 260 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TOR1AO14656 332 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SCAMP2O15127 329 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 RAD51BO15315 384 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 PI15O43692 258 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 IDH3BO43837 385 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 CEACAM4O75871 244 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 FARS2O95363 451 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 BCKDHBP21953 392 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 HMGB2P26583 209 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 GCAP28676 217 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 HOXA9P31269 272 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SLC1A2P43004 574 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 CCNHP51946 323 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ABCE1P61221 599 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 LCN2P80188 198 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 RGS1Q08116 209 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SRSF9Q13242 221 aaKnown RBP eCLIP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 PMS2P3Q13401 168 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 UBE2V2Q15819 145 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SLC25A52Q3SY17 297 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TP53I3Q53FA7 332 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TCTEX1D4Q5JR98 221 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SAPCD1Q5SSQ6 148 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 DCST2Q5T1A1 773 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 DCAF12Q5T6F0 453 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 GPR107Q5VW38 600 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 SLC22A10Q63ZE4 541 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 REEP3Q6NUK4 255 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 NEPROQ6NW34 567 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ZNF343Q6P1L6 599 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 FAHD2BQ6P2I3 314 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ATRAIDQ6UW56 229 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TMPRSS11AQ6ZMR5 421 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 Q71RC1 249 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 HSD11B1LQ7Z5J1 315 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ITPRIPQ8IWB1 547 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TTC29Q8NA56 475 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 OR5T1Q8NG75 326 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 CDC26Q8NHZ8 85 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 KIFAP3Q92845 792 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 FAHD2AQ96GK7 314 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 ZNF514Q96K75 400 aaPredicted RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 TSSK3Q96PN8 268 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 CTRCQ99895 268 aa3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 PELOQ9BRX2 385 aaKnown RBP3.77□□□□□ -1.81
ATP2B1-208ENST00000551009 DRC3Q9H069 523 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms