RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 IKZF5Q9H5V7 419 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 OCEL1Q9H607 264 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 BCL2L10Q9HD36 194 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 NPHS2Q9NP85 383 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 A4GALTQ9NPC4 353 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 METRNQ9UJH8 293 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 DCTN4Q9UJW0 460 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 PRDM4Q9UKN5 801 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 ZNF443Q9Y2A4 671 aaPredicted RBP10.64□□□□□ -0.71
DDX54-206ENST00000549271 TMED7Q9Y3B3 224 aa10.64□□□□□ -0.71
DDX54-206ENST00000549271 ZC3H12DA2A288 527 aaKnown RBP10.63□□□□□ -0.71
DDX54-206ENST00000549271 TMPRSS2O15393 492 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 ZNF208O43345 1280 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 EIF1BO60739 113 aaKnown RBP10.63□□□□□ -0.71
DDX54-206ENST00000549271 IGHV3-9P01782 118 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 ITGA5P08648 1049 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 PRG2P13727 222 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 NCF2P19878 526 aaPredicted RBP10.63□□□□□ -0.71
DDX54-206ENST00000549271 CCNA2P20248 432 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 TACR3P29371 465 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 POLR2HP52434 150 aaKnown RBP10.63□□□□□ -0.71
DDX54-206ENST00000549271 LIN52Q52LA3 116 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 RNF220Q5VTB9 566 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 HIST2H2BDQ6DRA6 164 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 SLC22A25Q6T423 547 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 ZNF440Q8IYI8 595 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 WDR31Q8NA23 367 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 OR52N5Q8NH56 324 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 FOXN4Q96NZ1 517 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 SPATA9Q9BWV2 254 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 RAD21L1Q9H4I0 556 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 PARPBPQ9NWS1 579 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 TMEM181Q9P2C4 612 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 POU2F3Q9UKI9 436 aa10.63□□□□□ -0.71
DDX54-206ENST00000549271 LOC390937A0A1W2PQ73 354 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 CCT8L1PA6NM43 557 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 ARAFP10398 606 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 IMPDH2P12268 514 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 BMP4P12644 408 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 GPX2P18283 190 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 ZNF83P51522 516 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 SLC35A1P78382 337 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 CHRNB3Q05901 458 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 SLC17A1Q14916 467 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 LARS2Q15031 903 aaKnown RBP10.62□□□□□ -0.71
DDX54-206ENST00000549271 ADRM1Q16186 407 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 ZSWIM7Q19AV6 140 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 RUNDC3AQ59EK9 446 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 ZNF311Q5JNZ3 666 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 RETREG3Q86VR2 466 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 CCDC103Q8IW40 242 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 DPP10Q8N608 796 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 NFKBIDQ8NI38 313 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 RABEP2Q9H5N1 569 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 PIF1Q9H611 641 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 SLC17A5Q9NRA2 495 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 ZNF232Q9UNY5 417 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 SLC9A8Q9Y2E8 581 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 AMDHD2Q9Y303 409 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 IFT52Q9Y366 437 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 FLVCR1Q9Y5Y0 555 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 PMF1-BGLAPU3KQ54 211 aa10.62□□□□□ -0.71
DDX54-206ENST00000549271 A0A0G2JND7 137 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 TMEM247A6NEH6 219 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 FRS3O43559 492 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 ETS2P15036 469 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 PPIBP23284 216 aaKnown RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 APOBEC3AP31941 199 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 FOXG1P55316 489 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 OR2B6P58173 313 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 CDK6Q00534 326 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 TGFBR3Q03167 851 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 IQCCQ4KMZ1 466 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 MIDNQ504T8 468 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 AWAT1Q58HT5 328 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 GCNT6Q5T4J0 391 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 WBP2NLQ6ICG8 309 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 CGB2Q6NT52 195 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 REEP3Q6NUK4 255 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 PAQR6Q6TCH4 344 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 SERPINA11Q86U17 422 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 COMTD1Q86VU5 262 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 LRRC17Q8N6Y2 441 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 OR52E4Q8NGH9 312 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 BBS10Q8TAM1 723 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 TMEM45BQ96B21 275 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 DDIT4LQ96D03 193 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 SORCS2Q96PQ0 1159 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 CPPED1Q9BRF8 314 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 SIKE1Q9BRV8 207 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 NAA11Q9BSU3 229 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 BPESC1Q9GZL8 116 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 TMEM38AQ9H6F2 299 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 METTL17Q9H7H0 456 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 FKRPQ9H9S5 495 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 SLC7A10Q9NS82 523 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 ARMCX1Q9P291 453 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 LEF1Q9UJU2 399 aaPredicted RBP10.61□□□□□ -0.71
DDX54-206ENST00000549271 FKBP7Q9Y680 259 aa10.61□□□□□ -0.71
DDX54-206ENST00000549271 LRP5LA4QPB2 252 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms