RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 PELI1Q96FA3 418 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 CMTM7Q96FZ5 175 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 FCRL1Q96LA6 429 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 GPR61Q9BZJ8 451 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 ACTR6Q9GZN1 396 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 C20orf85Q9H1P6 137 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 RNF167Q9H6Y7 350 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 PALMDQ9NP74 551 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 KCNIP1Q9NZI2 227 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 SEC14L3Q9UDX4 400 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 CHRNA9Q9UGM1 479 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 PCSK1NQ9UHG2 260 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 GNPTGQ9UJJ9 305 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 TRAPPC4Q9Y296 219 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 SLC25A15Q9Y619 301 aa1.78□□□□□ -2.12
CCDC38-206ENST00000548771 KDRP35968 1356 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 NSG1A0A0A6YYJ2 146 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 A0A0G2JLM5 398 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 A0A0G2JN53 185 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RBMY1BA6NDE4 496 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RBMY1EA6NEQ0 496 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 BTN3A3O00478 584 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 POLR2DO15514 142 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SPAG7O75391 227 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 AP2A1O95782 977 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 UGT2B4P06133 528 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 DCNP07585 359 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RBMY1DP0C7P1 496 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RBMY1A1P0DJD3 496 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 PNMTP11086 282 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 NPR2P20594 1047 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 DRD5P21918 477 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 PAX7P23759 505 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CMA1P23946 247 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 MMP11P24347 488 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CHI3L1P36222 383 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 MAP3K8P41279 467 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CD86P42081 329 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RGS4P49798 205 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RPS14P62263 151 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SNTB2Q13425 540 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 GRB7Q14451 532 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CYTH1Q15438 398 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SLC15A2Q16348 729 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 PDK4Q16654 411 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 MICBQ29980 383 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CCDC92Q53HC0 331 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 OR2G6Q5TZ20 316 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CTRB2Q6GPI1 263 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SLC25A34Q6PIV7 304 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 ZNF621Q6ZSS3 439 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 PGAP1Q75T13 922 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CAMK2N1Q7Z7J9 78 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 ZDHHC21Q8IVQ6 265 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 MYOCDQ8IZQ8 938 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CYB561D1Q8N8Q1 229 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CATSPER1Q8NEC5 780 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 OR4D5Q8NGN0 318 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 DTX3LQ8TDB6 740 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 C16orf45Q96MC5 204 aaPredicted RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 MRPL45Q9BRJ2 306 aaKnown RBP1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RAB34Q9BZG1 259 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RIBC2Q9H4K1 309 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CLMPQ9H6B4 373 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 REEP4Q9H6H4 257 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 CCL28Q9NRJ3 127 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SLC35D1Q9NTN3 355 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 QPCTLQ9NXS2 382 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 HOXC10Q9NYD6 342 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 SLC25A37Q9NYZ2 338 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 RNF14Q9UBS8 474 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 TMCO1Q9UM00 188 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 HEBP2Q9Y5Z4 205 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
CCDC38-206ENST00000548771 A0A1B0GWJ7 208 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 LOC110117498-PIK3R3F6TDL0 507 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 XPO1O14980 1071 aaKnown RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 BET1O15155 118 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 SS18L1O75177 396 aaPredicted RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 ATP5LO75964 103 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 OXSR1O95747 527 aaPredicted RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 TSPY4P0CV99 314 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 TSPY10P0CW01 314 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 HSMCR30P0CW71 290 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 RNASE2P10153 161 aaKnown RBP1.76□□□□□ -2.13
CCDC38-206ENST00000548771 HPGDP15428 266 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 RPA2P15927 270 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 HNF1AP20823 631 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 NMUP48645 174 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 EFNB2P52799 333 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 CBX1P83916 185 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 KIAA0087Q14695 138 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 RFX4Q33E94 735 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 TTC23Q5W5X9 447 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 TMEM225Q6GV28 225 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 FRMPD2BQ6IN97 320 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 ACOT4Q8N9L9 421 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 THRSPQ92748 146 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 FRZBQ92765 325 aa1.76□□□□□ -2.13
CCDC38-206ENST00000548771 EFHD2Q96C19 240 aaPredicted RBP1.76□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms