RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 NPAP1Q9NZP6 1156 aa13.47□□□□□ -0.25
SSH1-204ENST00000546697 SLC13A4Q9UKG4 626 aa13.47□□□□□ -0.25
SSH1-204ENST00000546697 RNF115Q9Y4L5 304 aa13.47□□□□□ -0.25
SSH1-204ENST00000546697 DSCAMO60469 2012 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 TRAF3IP2O43734 574 aaPredicted RBP13.46□□□□□ -0.25
SSH1-204ENST00000546697 PLAUP00749 431 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 MT-ATP6P00846 226 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 TGFBR3Q03167 851 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 LTBQ06643 244 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 FAPQ12884 760 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 MMEL1Q495T6 779 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 AAED1Q7RTV5 226 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 ABHD12BQ7Z5M8 362 aaPredicted RBP13.46□□□□□ -0.25
SSH1-204ENST00000546697 LSRQ86X29 649 aaPredicted RBP13.46□□□□□ -0.25
SSH1-204ENST00000546697 WDR31Q8NA23 367 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 MCHR1Q99705 422 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 ECSITQ9BQ95 431 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 ACANP16112 2415 aa13.46□□□□□ -0.25
SSH1-204ENST00000546697 LOC100653049A0A140TA62 436 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 TRAPPC13A5PLN9 417 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 MS4A18H0YCH9 400 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 M0R082 166 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 M0R3H8 397 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 OVOL3O00110 214 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 KRT34O76011 436 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 IGHV3-9P01782 118 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 OPN1SWP03999 348 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 CD3EP07766 207 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 HOXB1P14653 301 aaPredicted RBP13.45□□□□□ -0.26
SSH1-204ENST00000546697 PTAFRP25105 342 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 GRPRP30550 384 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 BSPH1Q075Z2 132 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 MS4A18Q3C1V0 323 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 C3orf36Q3SXR2 165 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ZNF672Q499Z4 452 aaPredicted RBP13.45□□□□□ -0.26
SSH1-204ENST00000546697 ENTPD8Q5MY95 495 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 WDR88Q6ZMY6 472 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 SLC15A3Q8IY34 581 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 TMEM123Q8N131 208 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 UBE2J2Q8N2K1 259 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 FAM169BQ8N8A8 192 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ZNF417Q8TAU3 575 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ADAMTS16Q8TE57 1224 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ZNF587Q96SQ5 575 aaPredicted RBP13.45□□□□□ -0.26
SSH1-204ENST00000546697 HOPXQ9BPY8 73 aaPredicted RBP13.45□□□□□ -0.26
SSH1-204ENST00000546697 PRSS27Q9BQR3 290 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 SLC17A5Q9NRA2 495 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ARMCX1Q9P291 453 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 BAG5Q9UL15 447 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 MGAT4BQ9UQ53 548 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 AMDHD2Q9Y303 409 aa13.45□□□□□ -0.26
SSH1-204ENST00000546697 ARID1AO14497 2285 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 C2CD3Q4AC94 2353 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 PLCE1Q9P212 2302 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 ARPC4-TTLL3A0A0A6YYG9 625 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SHISA9B4DS77 424 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SNX3O60493 162 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 RAD51DO75771 328 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 IFNA14P01570 189 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 TSPAN19P0C672 248 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 THRBP10828 461 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 COX4I1P13073 169 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 ZNF43P17038 809 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 PRDX6P30041 224 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 KDELR2P33947 212 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SELENOPP49908 381 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SH3BGRP55822 239 aaPredicted RBP13.44□□□□□ -0.26
SSH1-204ENST00000546697 ZP4Q12836 540 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 STK11Q15831 433 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 ZNF627Q7L945 461 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 LINGO2Q7L985 606 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SPATA21Q7Z572 469 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 PXKQ7Z7A4 578 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 GPAT4Q86UL3 456 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 DTX2Q86UW9 622 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 TREML1Q86YW5 311 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 RBM45Q8IUH3 476 aaKnown RBP13.44□□□□□ -0.26
SSH1-204ENST00000546697 LIPHQ8WWY8 451 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 RCN3Q96D15 328 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 LRR1Q96L50 414 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 CCL19Q99731 98 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 UBTD1Q9HAC8 227 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 MOV10Q9HCE1 1003 aaKnown RBP13.44□□□□□ -0.26
SSH1-204ENST00000546697 CMTM6Q9NX76 183 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SELENONQ9NZV5 590 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 ABCD2Q9UBJ2 740 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 UPB1Q9UBR1 384 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 SEC14L4Q9UDX3 406 aa13.44□□□□□ -0.26
SSH1-204ENST00000546697 MAGED1Q9Y5V3 778 aaPredicted RBP13.44□□□□□ -0.26
SSH1-204ENST00000546697 SETD2Q9BYW2 2564 aaPredicted RBP13.43□□□□□ -0.26
SSH1-204ENST00000546697 CIB4A0PJX0 185 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 NDUFAB1O14561 156 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 RBM34P42696 430 aaKnown RBP13.43□□□□□ -0.26
SSH1-204ENST00000546697 TMEM108Q6UXF1 575 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 MICU2Q8IYU8 434 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 OR2T12Q8NG77 320 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 AKAP1Q92667 903 aaKnown RBP eCLIP13.43□□□□□ -0.26
SSH1-204ENST00000546697 FBXW5Q969U6 566 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 SLC25A36Q96CQ1 311 aa13.43□□□□□ -0.26
SSH1-204ENST00000546697 MOGAT1Q96PD6 335 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms