RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 DPY19L2P2Q6ZN68 376 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 PARGQ86W56 976 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 ANGPTL6Q8NI99 470 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 ELSPBP1Q96BH3 223 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 MED30Q96HR3 178 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 KLHDC3Q9BQ90 382 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 LMF2Q9BU23 707 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 ALG12Q9BV10 488 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 SRA1Q9HD15 236 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 MRPL39Q9NYK5 338 aaKnown RBP14.44□□□□□ -0.1
LDLR-204ENST00000545707 ERVK-19Q9WJR5 959 aa14.44□□□□□ -0.1
LDLR-204ENST00000545707 DCTN6O00399 190 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 OIP5O43482 229 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 PEX14O75381 377 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 HRGP04196 525 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 F13BP05160 661 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 ZNF250P15622 560 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 CCR4P51679 360 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 DYRK1AQ13627 763 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 SLC25A25Q6KCM7 469 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 TMEM92Q6UXU6 159 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 ZNF550Q7Z398 422 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 KANSL1Q7Z3B3 1105 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 SLC22A18ASQ8N1D0 253 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 SYNPRQ8TBG9 265 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 HOXB13Q92826 284 aaPredicted RBP14.43□□□□□ -0.1
LDLR-204ENST00000545707 RELTQ969Z4 430 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 C3orf49Q96BT1 292 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 ZNF524Q96C55 264 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 CLIP3Q96DZ5 547 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 MOGAT1Q96PD6 335 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 ZNF436Q9C0F3 470 aaPredicted RBP14.43□□□□□ -0.1
LDLR-204ENST00000545707 ZNF281Q9Y2X9 895 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 CACNA1CQ13936 2221 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 TVP23AA6NH52 213 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 EPOPA6NHQ4 379 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 AIPO00170 330 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 KHDRBS3O75525 346 aaKnown RBP14.43□□□□□ -0.1
LDLR-204ENST00000545707 FCER2P06734 321 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 DCTDP32321 178 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 TPMTP51580 245 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 SNTA1Q13424 505 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 GAS6Q14393 721 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 LINC01590Q5TEZ4 76 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 CMIPQ8IY22 773 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 BCORP1Q8N888 145 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 OR8K3Q8NH51 312 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 C16orf52Q8NHV5 167 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 C1orf216Q8TAB5 229 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 TTC9Q92623 222 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 PMM1Q92871 262 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 NXPE2Q96DL1 559 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 SEMA4CQ9C0C4 833 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 NARFLQ9H6Q4 476 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 GLTPQ9NZD2 209 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 COQ3Q9NZJ6 369 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 OR5V1Q9UGF6 321 aa14.43□□□□□ -0.1
LDLR-204ENST00000545707 PPIEQ9UNP9 301 aaKnown RBP14.43□□□□□ -0.1
LDLR-204ENST00000545707 IGKV1D-42A0A075B6H8 117 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 SERINC4A6NH21 518 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 NPIPB9F8W1W9 429 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 GPANK1O95872 356 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 PSMB1P20618 241 aaKnown RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 CAPZA2P47755 286 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 PTH2RP49190 550 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 GPR143P51810 404 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 BLVRAP53004 296 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 ZNF141Q15928 474 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 FTMTQ8N4E7 242 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 HGDQ93099 445 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 CCDC120Q96HB5 630 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 NMNAT2Q9BZQ4 307 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 V9GY05 133 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 CEP290O15078 2479 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 CTDSPLO15194 276 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 OR7A10O76100 309 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 ADRA2CP18825 462 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 ANXA7P20073 488 aaKnown RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 HOXD11P31277 338 aaPredicted RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 PWWP2BQ6NUJ5 590 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 CBLN3Q6UW01 205 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 FGD2Q7Z6J4 655 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 TAF8Q7Z7C8 310 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 NKX3-1Q99801 234 aaPredicted RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 C7orf50Q9BRJ6 194 aaKnown RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 Q9N2J8 555 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 CA10Q9NS85 328 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 RXFP3Q9NSD7 469 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 SCP2D1Q9UJQ7 156 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 ING1Q9UK53 422 aaPredicted RBP14.42□□□□□ -0.1
LDLR-204ENST00000545707 ZNF337Q9Y3M9 751 aa14.42□□□□□ -0.1
LDLR-204ENST00000545707 I3L521 148 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 KHNYNO15037 678 aaKnown RBP14.41□□□□□ -0.1
LDLR-204ENST00000545707 KRT33AO76009 404 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 CDK2P24941 298 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 UBE2IP63279 158 aaKnown RBP14.41□□□□□ -0.1
LDLR-204ENST00000545707 HSF2Q03933 536 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 PUDPQ08623 228 aa14.41□□□□□ -0.1
LDLR-204ENST00000545707 KCNAB1Q14722 419 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms