RNA–Protein interactions for RNA: ENST00000545689.2

COL4A6-209, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,380 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-209ENST00000545689 MIB2Q96AX9 1013 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 ELSPBP1Q96BH3 223 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MS4A6EQ96DS6 147 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 QRSL1Q9H0R6 528 aaKnown RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NCDNQ9UBB6 729 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 C19orf53Q9UNZ5 99 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 CD300LBA8K4G0 201 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MAOBP27338 520 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MSX1P28360 303 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 HSD17B7P56937 341 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 CRMP1Q14194 572 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 IL20RBQ6UXL0 311 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MKXQ8IYA7 352 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 OR7G2Q8NG99 324 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 RSPRY1Q96DX4 576 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF419Q96HQ0 510 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NSG1A0A0A6YYJ2 146 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 GABRR1P24046 479 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MTFR2Q6P444 385 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SLC25A19Q9HC21 320 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NDUFB11Q9NX14 153 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 NUMBLQ9Y6R0 609 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 TMEM72A0PK05 275 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 D6RAR5 112 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SOCS6O14544 535 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 CPEP16870 476 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SHC1P29353 583 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 EEF1A1P68104 462 aaKnown RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 GPLD1P80108 840 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 MFGE8Q08431 387 aaPredicted RBP11.59□□□□□ -0.55
COL4A6-209ENST00000545689 TNK1Q13470 666 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 CCSMST1Q4G0I0 132 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 ZNF585AQ6P3V2 769 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 DNAAF1Q8NEP3 725 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 SLC6A18Q96N87 628 aa11.59□□□□□ -0.55
COL4A6-209ENST00000545689 TEX51A0A1B0GUA7 166 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ZAR1LA6NP61 321 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 RNF212BA8MTL3 300 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 BCAT2O15382 392 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CD79AP11912 226 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 GDF1P27539 372 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 HLA-DMAP28067 261 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 USF2Q15853 346 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 Q6ZNB5 142 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 MED25Q71SY5 747 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SLC22A24Q8N4F4 322 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 WDSUB1Q8N9V3 476 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 BCL2L10Q9HD36 194 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 LRFN1Q9P244 771 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 KDM4EB2RXH2 506 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 HMGN4O00479 90 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SRPXP78539 464 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ECH1Q13011 328 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 GALEQ14376 348 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 KRBOX4Q5JUW0 171 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF546Q86UE3 836 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 TAS2R16Q9NYV7 291 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 EIF1BO60739 113 aaKnown RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 TCRBP04435 133 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CALCBP10092 127 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 EVI2BP34910 448 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SYT14P1Q58G82 188 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CD276Q5ZPR3 534 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ACBD4Q8NC06 268 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 OR6M1Q8NGM8 313 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 OR4K15Q8NH41 348 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 C11orf54Q9H0W9 315 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SLC25A37Q9NYZ2 338 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 NME7Q9Y5B8 376 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 HSPB2A8KAH6 182 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 A8MVM7 634 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 IRS1P35568 1242 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CAV3P56539 151 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 DCDP81605 110 aaKnown RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 EEF1A2Q05639 463 aaKnown RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ASAH1Q13510 395 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 POU4F3Q15319 338 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 HSPB2Q16082 182 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SLC22A6Q4U2R8 563 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 EMC4Q5J8M3 183 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 RNF165Q6ZSG1 346 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ZNF679Q8IYX0 411 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 TCTEX1D2Q8WW35 142 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CHST8Q9H2A9 424 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 DUSP21Q9H596 190 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 WASH6PQ9NQA3 447 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 EHFQ9NZC4 300 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ABCA3Q99758 1704 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 MEIS3P1A6NDR6 274 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ACOD1A6NK06 481 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 TMEM127O75204 238 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 SBK3P0C264 359 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 ZMAT1Q5H9K5 638 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 CREB3L2Q70SY1 520 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 LINC00615Q96LM1 132 aaPredicted RBP11.58□□□□□ -0.56
COL4A6-209ENST00000545689 NMNAT3Q96T66 252 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 KCNJ16Q9NPI9 418 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 C1orf123Q9NWV4 160 aa11.58□□□□□ -0.56
COL4A6-209ENST00000545689 LUZP4Q9P127 313 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms