RNA–Protein interactions for RNA: ENST00000545170.5

ATXN3-216, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 6,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-216ENST00000545170 FLVCR2Q9UPI3 526 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 ETV7Q9Y603 341 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 ATRNL1Q5VV63 1379 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 ALKQ9UM73 1620 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 MN1Q10571 1320 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF98A6NK75 572 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 RGS11O94810 467 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 CHRNB4P30926 498 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 TGFBR1P36897 503 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 NPY4RP50391 375 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 VEZF1Q14119 521 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 LINC00299Q6ZSB3 139 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 TFGQ92734 400 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-216ENST00000545170 AKT1S1Q96B36 256 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 ZDHHC5Q9C0B5 715 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 CTDSP1Q9GZU7 261 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 GSTO2Q9H4Y5 243 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 MTHFD2LQ9H903 347 aaPredicted RBP8.05□□□□□ -1.12
ATXN3-216ENST00000545170 LMAN1LQ9HAT1 526 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 TLR9Q9NR96 1032 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 MMP26Q9NRE1 261 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 TMEM94Q12767 1356 aa8.05□□□□□ -1.12
ATXN3-216ENST00000545170 TEX50A0A1B0GTY4 177 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 A0A1W2PPH5 198 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF860A6NHJ4 632 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SLC38A8A6NNN8 435 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SYN3O14994 580 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 RPS12P25398 132 aaKnown RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 FCGR2CP31995 323 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LEXMQ3ZCV2 418 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 Q6ZTK2 550 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CLEC20AQ6ZU45 233 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 MAP3K3Q99759 626 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 STEAP1Q9UHE8 339 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 USP22Q9UPT9 525 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 HECW2Q9P2P5 1572 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 C1orf226A1L170 272 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF354AO60765 605 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 PPP1R11O60927 126 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 DBHP09172 617 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF728P0DKX0 622 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SULT1A3P0DMM9 295 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SULT1A4P0DMN0 295 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ACRV1P26436 265 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 HTR6P50406 440 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 COL19A1Q14993 1142 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 TCEAL1Q15170 157 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 PM20D1Q6GTS8 502 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LETMD1Q6P1Q0 360 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LCTLQ6UWM7 567 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 METTL27Q8N6F8 245 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 RBMXL3Q8N7X1 1067 aaKnown RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 DMBX1Q8NFW5 382 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SLC16A5O15375 505 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 RPL7P18124 248 aaKnown RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 MMP11P24347 488 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 POLR2IP36954 125 aaKnown RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 RFX2P48378 723 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 FRMPD2BQ6IN97 320 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LARP4Q71RC2 724 aaKnown RBP eCLIP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 OR1J2Q8NGS2 313 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 TMEM37Q8WXS4 190 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF778Q96MU6 729 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 OR1F2PQ96R84 312 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 F2RL3Q96RI0 385 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CCNL2Q96S94 520 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SMIM7Q9BQ49 75 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ABHD6Q9BV23 337 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 GSX1Q9H4S2 264 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CDH20Q9HBT6 801 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 MED16Q9Y2X0 877 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 HSD17B6O14756 317 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CLEC3BP05452 202 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 FGF4P08620 206 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 PIGAP37287 484 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 RPS24P62847 133 aaKnown RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 DSC1Q08554 894 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 MPEG1Q2M385 716 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 IER5LQ5T953 404 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LCN15Q6UWW0 184 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZNF429Q86V71 674 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 FOXN4Q96NZ1 517 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ELOA3CA0A087WX78 387 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LOC102723971A0A1B0GUV8 181 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SIAH2O43255 324 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 HOXC6P09630 235 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CSF3P09919 207 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 GALR1P47211 349 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 SLC35A2P78381 396 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 DLX2Q07687 328 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CBLL1Q75N03 491 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 OR51A4Q8NGJ6 313 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ZFPM2Q8WW38 1151 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 ANKRD19PQ9H560 264 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 LDAHQ9H6V9 325 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 NOX4Q9NPH5 578 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 DEC1Q9P2X7 70 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CLEC2DQ9UHP7 191 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 CROCCQ5TZA2 2017 aa8.04□□□□□ -1.12
ATXN3-216ENST00000545170 TRBV4-1A0A0J9YWV2 114 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms