RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 SERPINA2P20848 420 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 GATA2P23769 480 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 XCR1P46094 333 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 CASP4P49662 377 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 HLCSP50747 726 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 CXCL6P80162 114 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 CSTF1Q05048 431 aaKnown RBP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 PDZK1Q5T2W1 519 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 TPGS2Q68CL5 300 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 GPR65Q8IYL9 337 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 ZNF485Q8NCK3 441 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 CATSPER1Q8NEC5 780 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 OR10A7Q8NGE5 316 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 OR13C2Q8NGS9 318 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 AGAP11Q8TF27 550 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 GTSF1Q8WW33 167 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 IL1F10Q8WWZ1 152 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 FBXO32Q969P5 355 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 MS4A14Q96JA4 679 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 APOL2Q9BQE5 337 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 MTG1Q9BT17 334 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 LRRN3Q9H3W5 708 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 PPDPFQ9H3Y8 114 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 PXMP2Q9NR77 195 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 AIPL1Q9NZN9 384 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 C6orf203Q9P0P8 240 aaPredicted RBP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 CDH9Q9ULB4 789 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 SCML2Q9UQR0 700 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 POLDIP2Q9Y2S7 368 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 AK6Q9Y3D8 172 aaKnown RBP2.84□□□□□ -1.95
SCFD1-207ENST00000544052 MTCH2Q9Y6C9 303 aa2.84□□□□□ -1.95
SCFD1-207ENST00000544052 MYO10Q9HD67 2058 aa2.84□□□□□ -1.96
SCFD1-207ENST00000544052 WDFY4Q6ZS81 3184 aa2.84□□□□□ -1.96
SCFD1-207ENST00000544052 PLXNA3P51805 1871 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 KIF2AO00139 706 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 FOXE1O00358 373 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 CDX4O14627 284 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 B4GALT2O60909 372 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 N4BP1O75113 896 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ZNF254O75437 659 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 PLEKHA8P1O95397 391 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 H2BFMP0C1H6 154 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 GZMAP12544 262 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 POLR2EP19388 210 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 CHMLP26374 656 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 RDXP35241 583 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 DDX39BQ13838 428 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TIMM50Q3ZCQ8 353 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 GLYR1Q49A26 553 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TCTEX1D4Q5JR98 221 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 UQCC3Q6UW78 93 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 LRRC75A-AS1Q8N1F1 130 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 C15orf54Q8N8G6 183 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ATP6V0D2Q8N8Y2 350 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 OR2L2Q8NH16 312 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ESR2Q92731 530 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 COQ2Q96H96 371 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 C1orf147Q96MC9 270 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SPATA16Q9BXB7 569 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ANGPTL2Q9UKU9 493 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SAMD4AQ9UPU9 718 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 PDE10AQ9Y233 779 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TIMM10BQ9Y5J6 103 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ABCB11O95342 1321 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 DOCK6Q96HP0 2047 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TRIP11Q15643 1979 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 MUC6Q6W4X9 2439 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 IGHV3-35A0A0C4DH35 117 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 LOC100131303A0A0U1RQF7 123 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TMEM110-MUSTN1A8MSY1 372 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 E7EWF7 191 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ZBTB5O15062 677 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TAPBPO15533 448 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 CGAP01215 116 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 CAPN1P07384 714 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 H2AFZP0C0S5 128 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SFTPCP11686 197 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ADORA2BP29275 332 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 VEGFCP49767 419 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SLC25A1P53007 311 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 MRPS11P82912 194 aaKnown RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ASAH1Q13510 395 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 TGIF1Q15583 401 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 KCTD21Q4G0X4 260 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 ATL3Q6DD88 541 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 OR4F3Q6IEY1 312 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 GSG1LQ6UXU4 331 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 Q6ZPB1 254 aaPredicted RBP2.83□□□□□ -1.96
SCFD1-207ENST00000544052 OR4D9Q8NGE8 314 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 NPY6RQ99463 290 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 RHBGQ9H310 441 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 FN3KRPQ9HA64 309 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 LY9Q9HBG7 655 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 POLE4Q9NR33 117 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SENP1Q9P0U3 644 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 SPRR3Q9UBC9 169 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 RASD1Q9Y272 281 aa2.83□□□□□ -1.96
SCFD1-207ENST00000544052 USP34Q70CQ2 3546 aa2.82□□□□□ -1.96
SCFD1-207ENST00000544052 DMDP11532 3685 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms