RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 AMDHD1Q96NU7 426 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 COL21A1Q96P44 957 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 TSSK3Q96PN8 268 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 BTBD9Q96Q07 612 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 NXF5Q9H1B4 397 aaKnown RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 TUBB1Q9H4B7 451 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 GLIPR2Q9H4G4 154 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 ZDHHC11Q9H8X9 412 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 FOLH1BQ9HBA9 442 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 ACKR4Q9NPB9 350 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 CHST11Q9NPF2 352 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 ACSS1Q9NUB1 689 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 DDX18Q9NVP1 670 aaKnown RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 KLRF1Q9NZS2 232 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 PCDHGB4Q9UN71 923 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 TMEM5Q9Y2B1 443 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 MEMO1Q9Y316 297 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 PAM16Q9Y3D7 125 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 LSM4Q9Y4Z0 139 aaKnown RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 LRRC42Q9Y546 428 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 KLF2Q9Y5W3 355 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 CHCHD2Q9Y6H1 151 aaPredicted RBP4.85□□□□□ -1.63
CPSF7-220ENST00000541963 ZGRF1Q86YA3 2104 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 SPTA1P02549 2419 aa4.85□□□□□ -1.63
CPSF7-220ENST00000541963 TLN1Q9Y490 2541 aaKnown RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 A0A1W2PRB8 838 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PINLYPA6NC86 204 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TRPC5OSA6NMA1 111 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NPIPB11E5RHQ5 1161 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ANKRD65E5RJM6 399 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PRSS44E7EML9 344 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NPIPA2E9PIF3 369 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NPIPA3F8WFD2 350 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 SLCO1B7G3V0H7 640 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 UPK1AO00322 258 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 EMC8O43402 210 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 WDR1O75083 606 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ICOSLGO75144 302 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TRIM3O75382 744 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NDUFB4O95168 129 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 LRATO95237 230 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CLDN14O95500 239 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 KRT16P08779 473 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CT45A8P0DMV1 189 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CT45A9P0DMV2 189 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 BCKDHAP12694 445 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ETFAP13804 333 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NQO1P15559 274 aaKnown RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ZNF182P17025 639 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 SDC1P18827 310 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 BGNP21810 368 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CALB2P22676 271 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 GDF1P27539 372 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 MAGEA5P43359 124 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 MAGOHP61326 146 aaKnown RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 FAM27E3Q08E93 113 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ZNF155Q12901 538 aaPredicted RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 HSPB3Q12988 150 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 FGFBP1Q14512 234 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 NNATQ16517 81 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ESCO2Q56NI9 601 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CT45A2Q5DJT8 189 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 XKR7Q5GH72 579 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 C6orf136Q5SQH8 315 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 IL23RQ5VWK5 629 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TIGD3Q6B0B8 471 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 BHLHB9Q6PI77 547 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TMEM107Q6UX40 140 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ANGPTL8Q6UXH0 198 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TMEM64Q6YI46 380 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PIGWQ7Z7B1 504 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PM20D2Q8IYS1 436 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 LRRC34Q8IZ02 419 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PRR22Q8IZ63 422 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ARHGAP24Q8N264 748 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 OR2L13Q8N349 312 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PARP16Q8N5Y8 322 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CDRT4Q8N9R6 151 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 OR7G2Q8NG99 324 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 OR2T11Q8NH01 316 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 RAB3IL1Q8TBN0 382 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TMEM163Q8TC26 289 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 CA5BP1Q8WTZ4 195 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 OR5P2Q8WZ92 322 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 RND1Q92730 232 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 HGDQ93099 445 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TMBIM1Q969X1 311 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 MOAP1Q96BY2 351 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 PERPQ96FX8 193 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 EGLN2Q96KS0 407 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 VSTM2LQ96N03 204 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 RILPQ96NA2 401 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 OSBPL11Q9BXB4 747 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 MAP6D1Q9H9H5 199 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 ATP6V1HQ9UI12 483 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 TINAGQ9UJW2 476 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 EXO1Q9UQ84 846 aaKnown RBP4.84□□□□□ -1.63
CPSF7-220ENST00000541963 SESN1Q9Y6P5 492 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 COMMD3-BMI1R4GMX3 469 aa4.84□□□□□ -1.63
CPSF7-220ENST00000541963 A3GALT2U3KPV4 340 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms