RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 ELOA3Q8NG57 546 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 ZNF563Q8TA94 476 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 RNF217Q8TC41 542 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 LIPHQ8WWY8 451 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 ST8SIA1Q92185 356 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 UBE2FQ969M7 185 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 TIMP4Q99727 224 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 AASSQ9UDR5 926 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 SCOCQ9UIL1 159 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 OSGIN2Q9Y236 505 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 SIGLEC7Q9Y286 467 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 SLC6A5Q9Y345 797 aa9.52□□□□□ -0.89
ATL3-204ENST00000540699 CACNA1CQ13936 2221 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 WIPF3A6NGB9 483 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 EFCAB9A8MZ26 197 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 NPIPA2E9PIF3 369 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 NPIPA3F8WFD2 350 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 PRRG2O14669 202 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ZNHIT1O43257 154 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 GMFGO60234 142 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 NPIPB7O75200 414 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ABOP16442 354 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ZNF708P17019 499 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 PRKCAP17252 672 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 CRHBPP24387 322 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 EIF1P41567 113 aaKnown RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 LHX2P50458 406 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ZNF41P51814 821 aaPredicted RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 POLR2HP52434 150 aaKnown RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 CLDN18P56856 261 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 SNRPGP62308 76 aaKnown RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 TOP3AQ13472 1001 aaPredicted RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 C3AR1Q16581 482 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 GXYLT1Q4G148 440 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 TMEM201Q5SNT2 666 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ADGRG3Q86Y34 549 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 CDK20Q8IZL9 346 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 IQCF1Q8N6M8 205 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 OR13C2Q8NGS9 318 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 OR4Q3Q8NH05 313 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 PRR7Q8TB68 274 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 TEX47Q8TBZ9 253 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 POC1BQ8TC44 478 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 OSTF1Q92882 214 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ABTB1Q969K4 478 aaPredicted RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 SGTBQ96EQ0 304 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 WDYHV1Q96HA8 205 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 MRGPRX4Q96LA9 322 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 SFXN2Q96NB2 322 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 NPAS1Q99742 590 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 PIGQQ9BRB3 760 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 POLDIP3Q9BY77 421 aaKnown RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 MRPS26Q9BYN8 205 aaKnown RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 OR52D1Q9H346 318 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 EXO5Q9H790 373 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 TBC1D23Q9NUY8 699 aa9.51□□□□□ -0.89
ATL3-204ENST00000540699 ERRFI1Q9UJM3 462 aaPredicted RBP9.51□□□□□ -0.89
ATL3-204ENST00000540699 TMED7-TICAM2A0A0A6YYA0 188 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 A0A1B0GUH1 482 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 TMEM72A0PK05 275 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 FAM47E-STBD1D6RA91 191 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 M0R129 80 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 BHLHE40O14503 412 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 MPZL2O60487 215 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 WDR1O75083 606 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 FZD7O75084 574 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 OR7A10O76100 309 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 CLDN1O95832 211 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 NUDT14O95848 222 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 TPOP07202 933 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 HOXD4P09016 255 aaPredicted RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 TSPAN19P0C672 248 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 FMO3P31513 532 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 PTGER4P35408 488 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 HTR3AP46098 478 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SLC9A3P48764 834 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SMSP52788 366 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 RPS4XP62701 263 aaKnown RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 LTBQ06643 244 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 FOXF1Q12946 379 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 ZNF74Q16587 644 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SMN1Q16637 294 aaKnown RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 PGGHGQ32M88 737 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 ZBED5Q49AG3 693 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SLC25A30Q5SVS4 291 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 RAET1LQ5VY80 246 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 RPL13AP3Q6NVV1 102 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SLC27A4Q6P1M0 643 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 THSD4Q6ZMP0 1018 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 MAMDC2Q7Z304 686 aaPredicted RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 CD163Q86VB7 1156 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 PM20D2Q8IYS1 436 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 SLC43A2Q8N370 569 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 FANK1Q8TC84 345 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 STK35Q8TDR2 534 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 TRUB1Q8WWH5 349 aaKnown RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 TMEM234Q8WY98 164 aa9.5□□□□□ -0.89
ATL3-204ENST00000540699 KTI12Q96EK9 354 aaPredicted RBP9.5□□□□□ -0.89
ATL3-204ENST00000540699 SAMD8Q96LT4 415 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms