RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 TSSK2Q96PF2 358 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 GPX7Q96SL4 187 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 ACTR6Q9GZN1 396 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 TSPAN10Q9H1Z9 355 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 RXFP3Q9NSD7 469 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ELF5Q9UKW6 265 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 MYO9BQ13459 2157 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 SZT2Q5T011 3432 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 MEIKINA0A087WXM9 373 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ELOA3DA6NLF2 546 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 PRAMEF26H0Y7S4 382 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 CLDN4O14493 209 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 IGHV4-34P06331 123 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 GRK6P43250 576 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 CCR9P51686 369 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 DLX2Q07687 328 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 ELOA3BQ3SY89 546 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ZNF684Q5T5D7 378 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 FGD2Q7Z6J4 655 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 JAZF1Q86VZ6 243 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 C10orf53Q8N6V4 93 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 ELOA3Q8NG57 546 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 OR52I2Q8NH67 350 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
USP44-203ENST00000537435 SLC19A3Q9BZV2 496 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 S1PR5Q9H228 398 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 LIN7BQ9HAP6 207 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 HRASLSQ9HDD0 168 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 B3GNT2Q9NY97 397 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 PTTG3PQ9NZH4 202 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 CLEC1BQ9P126 229 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 FLVCR2Q9UPI3 526 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 V9GY05 133 aa13.07□□□□□ -0.32
USP44-203ENST00000537435 LRP4O75096 1905 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TMEM72A0PK05 275 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 B4DGG1 531 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 HPXP02790 462 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 IFNA16P05015 189 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 OR8G3PP0DMU2 310 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 POU3F3P20264 500 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 FUT7Q11130 342 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 HTR4Q13639 388 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 KLHL26Q53HC5 615 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TMEM255AQ5JRV8 349 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TEX261Q6UWH6 196 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 PIAS4Q8N2W9 510 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 METTL27Q8N6F8 245 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 OR6C4Q8NGE1 309 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 ZDHHC1Q8WTX9 485 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TTC9Q92623 222 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 HGDQ93099 445 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 SPRTNQ9H040 489 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 RABL2AQ9UBK7 228 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 RABL2BQ9UNT1 228 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 U3KQ87 197 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 A0A1B0GVI7 797 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 PEX14O75381 377 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 ITGA10O75578 1167 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TPOP07202 933 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 UQCRC1P31930 480 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 CCR4P51679 360 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 SKP1P63208 163 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 CAMK2DQ13557 499 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 FZD2Q14332 565 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 CD226Q15762 336 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.06□□□□□ -0.32
USP44-203ENST00000537435 FAM69AQ5T7M9 428 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 STPG1Q5TH74 334 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 PARGQ86W56 976 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 ZNF615Q8N8J6 731 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 MRPL38Q96DV4 380 aaKnown RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 MOGAT1Q96PD6 335 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 DLL4Q9NR61 685 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 AKAP7Q9P0M2 348 aaPredicted RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 HIF3AQ9Y2N7 669 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 TMA7Q9Y2S6 64 aaKnown RBP13.06□□□□□ -0.32
USP44-203ENST00000537435 HEATR5AQ86XA9 2040 aa13.06□□□□□ -0.32
USP44-203ENST00000537435 SPTY2D1-AS1A0A0U1RR47 76 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 A0A1W2PQ72 361 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 GABARAPH6UMI1 98 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 OIP5O43482 229 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 RAF1P04049 648 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 THEGLP0DJG4 465 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 DNASE1P24855 282 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 CTXN1P60606 82 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ZP1P60852 638 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ZNF74Q16587 644 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 WBP2NLQ6ICG8 309 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 FAM122BQ7Z309 247 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ZNF440Q8IYI8 595 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 LSM14AQ8ND56 463 aaKnown RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 OR11G2Q8NGC1 345 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 HEXA-AS1Q9H8Q6 139 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 NANSQ9NR45 359 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 ZNF275Q9NSD4 429 aaPredicted RBP13.05□□□□□ -0.32
USP44-203ENST00000537435 KLHL9Q9P2J3 617 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 KLHDC2Q9Y2U9 406 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 LEUTXA8MZ59 168 aa13.05□□□□□ -0.32
USP44-203ENST00000537435 SRPX2O60687 465 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms