RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CIB4A0PJX0 185 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 TRAPPC13A5PLN9 417 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 DPRXA6NFQ7 191 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 OR5H1A6NKK0 313 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 MS4A18H0YCH9 400 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 KPNA4O00629 521 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 TRAF3IP2O43734 574 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 UPK3AO75631 287 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 VAMP5O95183 116 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 GTF2E2P29084 291 aaKnown RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 GSK3BP49841 420 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 CLDN17P56750 224 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 SLC25A3Q00325 362 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 PIN1Q13526 163 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 PPA1Q15181 289 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 GABRA6Q16445 453 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 MS4A18Q3C1V0 323 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 TIMM23BQ5SRD1 257 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 NCMAPQ5T1S8 102 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 C5orf46Q6UWT4 87 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 HACD2Q6Y1H2 254 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 DEF8Q6ZN54 512 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 H1FNTQ75WM6 255 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 ARPINQ7Z6K5 226 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 OR52N5Q8NH56 324 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 LILRB1Q8NHL6 650 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 RASSF5Q8WWW0 418 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 SLC41A3Q96GZ6 507 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 TPD52L3Q96J77 140 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 ALKBH3Q96Q83 286 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 FOXC2Q99958 501 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 HOPXQ9BPY8 73 aaPredicted RBP11.57□□□□□ -0.56
PRKDC-206ENST00000536429 CXXC4Q9H2H0 198 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 SLCO5A1Q9H2Y9 848 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 UPB1Q9UBR1 384 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 BAG5Q9UL15 447 aa11.57□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF432O94892 652 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 NCK1P16333 377 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF43P17038 809 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 CDH2P19022 906 aaPredicted RBP11.56□□□□□ -0.56
PRKDC-206ENST00000536429 PRDX6P30041 224 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 NR1H2P55055 460 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 PSME3P61289 254 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 IL1RL1Q01638 556 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 BSPH1Q075Z2 132 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 FOXD4Q12950 439 aaPredicted RBP11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ACKR1Q16570 336 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 DEFB113Q30KQ7 82 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 NHLRC1Q6VVB1 395 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 VTCN1Q7Z7D3 282 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ALPK2Q86TB3 2170 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 NKAIN4Q8IVV8 208 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 C10orf53Q8N6V4 93 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 WDR31Q8NA23 367 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 OR6S1Q8NH40 331 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 MBD6Q96DN6 1003 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 CMTM5Q96DZ9 223 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 MUS81Q96NY9 551 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 OXGR1Q96P68 337 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 EPYCQ99645 322 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF426Q9BUY5 554 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 C1QTNF6Q9BXI9 259 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 AMBRA1Q9C0C7 1298 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ALG2Q9H553 416 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 MEPEQ9NQ76 525 aaPredicted RBP11.56□□□□□ -0.56
PRKDC-206ENST00000536429 ABCD2Q9UBJ2 740 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 B3GALT5Q9Y2C3 310 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 SLC25A15Q9Y619 301 aa11.56□□□□□ -0.56
PRKDC-206ENST00000536429 CXCR6O00574 342 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 PLPP3O14495 311 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 CLOCKO15516 846 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 CH25HO95992 272 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 NQO1P15559 274 aaKnown RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 MPGP29372 298 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF83P51522 516 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 UGT2B15P54855 530 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 LSM11P83369 360 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 SPOCK1Q08629 439 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 PMS2P3Q13401 168 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 C1DQ13901 141 aaKnown RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF74Q16587 644 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 HIKESHIQ53FT3 197 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 PHYHD1Q5SRE7 291 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ADAM5Q6NVV9 412 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 SPNS3Q6ZMD2 512 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 SLC46A3Q7Z3Q1 461 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 LRRC17Q8N6Y2 441 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 RBM15BQ8NDT2 890 aaKnown RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ADPRHL1Q8NDY3 354 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 KBTBD8Q8NFY9 601 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 PFN4Q8NHR9 129 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 TMEM255BQ8WV15 326 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 AKAP1Q92667 903 aaKnown RBP eCLIP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ZNF837Q96EG3 531 aaPredicted RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 TXNDC15Q96J42 360 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 USB1Q9BQ65 265 aaKnown RBP11.55□□□□□ -0.56
PRKDC-206ENST00000536429 EMC6Q9BV81 110 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ASPNQ9BXN1 380 aa11.55□□□□□ -0.56
PRKDC-206ENST00000536429 ARL8BQ9NVJ2 186 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms