RNA–Protein interactions for RNA: ENST00000534042.5

CAPRIN1-216, Transcript of cell cycle associated protein 1, humanhuman

TSL 5

Gene CAPRIN1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-216ENST00000534042 PPOXP50336 477 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 IDH3GP51553 393 aaPredicted RBP14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 CLDN17P56750 224 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 ROR2Q01974 943 aaKnown RBP14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 RPS26P11Q5JNZ5 115 aaPredicted RBP14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 SERPINA11Q86U17 422 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 FAM169BQ8N8A8 192 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 SPATA9Q9BWV2 254 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 BPESC1Q9GZL8 116 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 TPT1P8Q9HAU6 139 aa14.65□□□□□ -0.06
CAPRIN1-216ENST00000534042 A0A0G2JPF8 293 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 HNRNPCL2B2RXH8 293 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 HNRNPCL3B7ZW38 293 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 HNRNPCL1O60812 293 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 SLC22A3O75751 556 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 ERCC1P07992 297 aaPredicted RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZCCHC18P0CG32 403 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 HNRNPCL4P0DMR1 293 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 PNMTP11086 282 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 IDO1P14902 403 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZNF43P17038 809 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 GTF2E2P29084 291 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 CALCRP30988 508 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 SRSF2Q01130 221 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 PDCD4Q53EL6 469 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 HHATQ5VTY9 493 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 ATG16L1Q676U5 607 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 NXNQ6DKJ4 435 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 KDM8Q8N371 416 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 NUP37Q8NFH4 326 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 TMEM19Q96HH6 336 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 NELFAQ9H3P2 528 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 RMND5AQ9H871 391 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 SEC61A2Q9H9S3 476 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 THUMPD1Q9NXG2 353 aaKnown RBP14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 RCE1Q9Y256 329 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 IFT52Q9Y366 437 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 CHST2Q9Y4C5 530 aa14.64□□□□□ -0.07
CAPRIN1-216ENST00000534042 NBEAL1Q6ZS30 2694 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 FTCDNL1E5RQL4 147 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 hCG_2039718K7EN88 272 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 STAMBPO95630 424 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 IGKV3-15P01624 115 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 KITP10721 976 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 CBR1P16152 277 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 RPS5P46782 204 aaKnown RBP14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ARF1P84077 181 aaKnown RBP14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 HGFACQ04756 655 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 SQLEQ14534 574 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 GTDC1Q4AE62 458 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZNF311Q5JNZ3 666 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 CEP85LQ5SZL2 805 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 GPR137CQ8N3F9 429 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ANKRD42Q8N9B4 389 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ANKK1Q8NFD2 765 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 NEU4Q8WWR8 484 aaPredicted RBP14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ITCHQ96J02 903 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 OXGR1Q96P68 337 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZNF442Q9H7R0 627 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 THAP1Q9NVV9 213 aa14.63□□□□□ -0.07
CAPRIN1-216ENST00000534042 LRP5LA4QPB2 252 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 RPL36A-HNRNPH2H7BZ11 118 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 HAX1O00165 279 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 SLC43A1O75387 559 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZNF432O94892 652 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 CELA3BP08861 270 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 DAOP14920 347 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 NPR2P20594 1047 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 THBS4P35443 961 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 HOXC5Q00444 222 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 EGR4Q05215 589 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 C1DQ13901 141 aaKnown RBP14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 CR1LQ2VPA4 569 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 TNFAIP8L3Q5GJ75 292 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 C6orf10Q5SRN2 563 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 LIPNQ5VXI9 398 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 MSANTD1Q6ZTZ1 278 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 SPATA21Q7Z572 469 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZBTB9Q96C00 473 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 ANKRD27Q96NW4 1050 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 DOK1Q99704 481 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 PTDSS2Q9BVG9 487 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 GPR35Q9HC97 309 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 RPS6KB2Q9UBS0 482 aa14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 V9GYY5 206 aaPredicted RBP14.62□□□□□ -0.07
CAPRIN1-216ENST00000534042 SLCO1B7G3V0H7 640 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 GIFP27352 417 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 ARR3P36575 388 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 CHN2P52757 468 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 NPRL3Q12980 569 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 CEACAM16Q2WEN9 425 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 MYPOPQ86VE0 399 aaPredicted RBP14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 SVOPLQ8N434 492 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 SLC35B4Q969S0 331 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 KTI12Q96EK9 354 aaPredicted RBP14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 SOX7Q9BT81 388 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 DYNLRB1Q9NP97 96 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 ZIM2Q9NZV7 527 aa14.61□□□□□ -0.07
CAPRIN1-216ENST00000534042 IGHV2OR16-5A0A0B4J2B6 119 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms