RNA–Protein interactions for RNA: ENST00000533413.5

CKAP5-212, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best)

Gene CKAP5, Length 3,084 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-212ENST00000533413 TSSK6Q9BXA6 273 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 RANBP3Q9H6Z4 567 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 GAREM1Q9H706 876 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 NMNAT1Q9HAN9 279 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 EQTNQ9NQ60 294 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 KLHL1Q9NR64 748 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ACER3Q9NUN7 267 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 BABAM2Q9NXR7 383 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 NDRG3Q9UGV2 375 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 PRUNE2Q8WUY3 3088 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 PLXND1Q9Y4D7 1925 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 MUC22E2RYF6 1773 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 C1orf226A1L170 272 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 TRABD2BA6NFA1 517 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 EFCAB7A8K855 629 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ITGB1BP1O14713 200 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SLC30A4O14863 429 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ORC5O43913 435 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 HCN1O60741 890 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 C6orf47O95873 294 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CD160O95971 181 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 IGSF6O95976 241 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CSF3P09919 207 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 NR2F6P10588 404 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SLC2A1P11166 492 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 IDSP22304 550 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SERPINA4P29622 427 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 GKP32189 559 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 RPL3P39023 403 aaKnown RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CD96P40200 585 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CSKP41240 450 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CRYBB2P43320 205 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 XCR1P46094 333 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ARRB1P49407 418 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 XKP51811 444 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CRYBA2P53672 197 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 RAB4BP61018 213 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SNRPGP62308 76 aaKnown RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 MRPS21P82921 87 aaKnown RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SEMG2Q02383 582 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 MLLT11Q13015 90 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 NAE1Q13564 534 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 HEPACAMQ14CZ8 416 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 EXT1Q16394 746 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 TATDN3Q17R31 274 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SPIN4Q56A73 249 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 C22orf42Q6IC83 251 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ADCK2Q7Z695 626 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 CDK20Q8IZL9 346 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 TCEANCQ8N8B7 351 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 EDARADDQ8WWZ3 215 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SLC25A46Q96AG3 418 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 PPCDCQ96CD2 204 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 TEFMQ96QE5 360 aaKnown RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 BHLHE41Q9C0J9 482 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 ZNF350Q9GZX5 532 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 REEP4Q9H6H4 257 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 C19orf12Q9NSK7 152 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 POT1Q9NUX5 634 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SPATA6Q9NWH7 488 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 KLHL28Q9NXS3 571 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 WSB2Q9NYS7 404 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 COMMD3Q9UBI1 195 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 FTSJ1Q9UET6 329 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 MGAT4BQ9UQ53 548 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SLC27A6Q9Y2P4 619 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 HSPB11Q9Y547 144 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 SPIN1Q9Y657 262 aaPredicted RBP4.99□□□□□ -1.61
CKAP5-212ENST00000533413 COL6A3P12111 3177 aa4.99□□□□□ -1.61
CKAP5-212ENST00000533413 PRAMEF33A0A0G2JMD5 474 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 FAM230AA0A1W2PPH8 454 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 ANKDD1BA6NHY2 528 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 NPIPB13A6NJU9 1138 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 OR2AT4A6NND4 320 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 NPIPB4C9JG80 1138 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PRAMEF10O60809 474 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 GCM2O75603 506 aaPredicted RBP4.98□□□□□ -1.61
CKAP5-212ENST00000533413 GATBO75879 557 aaKnown RBP4.98□□□□□ -1.61
CKAP5-212ENST00000533413 SOX14O95416 240 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 ADAP00813 363 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 SRPRAP08240 638 aaKnown RBP4.98□□□□□ -1.61
CKAP5-212ENST00000533413 ITGB7P26010 798 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PSMB6P28072 239 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 MSX1P28360 303 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 CD80P33681 288 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PTGER4P35408 488 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 KIR2DL3P43628 341 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 TGM4P49221 684 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 MMP16P51512 607 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 HMGA2P52926 109 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PSMD4P55036 377 aaKnown RBP4.98□□□□□ -1.61
CKAP5-212ENST00000533413 NHLH1Q02575 133 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 C2orf80Q0P641 193 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 MAB21L1Q13394 359 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 IRF4Q15306 451 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 ATP13A5Q4VNC0 1218 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PLCXD3Q63HM9 321 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 SAXO2Q658L1 398 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 PAMR1Q6UXH9 720 aa4.98□□□□□ -1.61
CKAP5-212ENST00000533413 C1orf210Q8IVY1 113 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms