RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 MS4A18H0YCH9 400 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 SERPINA1P01009 418 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 NCK1P16333 377 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 CBLP22681 906 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 RBM34P42696 430 aaKnown RBP18.03■□□□□ 0.48
CCS-208ENST00000533244 TAS2R41P59536 307 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 ZNF74Q16587 644 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 MS4A18Q3C1V0 323 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 SEZ6L2Q6UXD5 910 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 CDH24Q86UP0 819 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 NKAIN4Q8IVV8 208 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 UBE2J2Q8N2K1 259 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 GEMIN6Q8WXD5 167 aaKnown RBP18.03■□□□□ 0.48
CCS-208ENST00000533244 PRRC1Q96M27 445 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 ASPNQ9BXN1 380 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 AMBRA1Q9C0C7 1298 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 PLEKHF2Q9H8W4 249 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 MEPEQ9NQ76 525 aaPredicted RBP18.03■□□□□ 0.48
CCS-208ENST00000533244 NDE1Q9NXR1 346 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 TAS2R16Q9NYV7 291 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 EGFL7Q9UHF1 273 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 A4GNTQ9UNA3 340 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 RCE1Q9Y256 329 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 OTOGQ6ZRI0 2925 aa18.03■□□□□ 0.48
CCS-208ENST00000533244 TRAF3IP2O43734 574 aaPredicted RBP18.02■□□□□ 0.48
CCS-208ENST00000533244 ZNF682O95780 498 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 IGF2P01344 180 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 ITGA5P08648 1049 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 ZNF43P17038 809 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 MNAT1P51948 309 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 FOXG1P55316 489 aaPredicted RBP18.02■□□□□ 0.48
CCS-208ENST00000533244 FAPQ12884 760 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 TAB1Q15750 504 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 IFI44LQ53G44 452 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 C16orf89Q6UX73 402 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 NHLRC1Q6VVB1 395 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 RNF148Q8N7C7 305 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 POMGNT2Q8NAT1 580 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 HSD17B8Q92506 261 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 NRGNQ92686 78 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 FAM162AQ96A26 154 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 HSH2DQ96JZ2 352 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 SLCO5A1Q9H2Y9 848 aa18.02■□□□□ 0.48
CCS-208ENST00000533244 MYO9AB2RTY4 2548 aa18.02■□□□□ 0.47
CCS-208ENST00000533244 ZNF432O94892 652 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 HPRP00739 348 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 IFNW1P05000 195 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 SELENOPP49908 381 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 BEX5Q5H9J7 111 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 SAMD4BQ5PRF9 694 aaKnown RBP18.01■□□□□ 0.47
CCS-208ENST00000533244 GLYATQ6IB77 296 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 OR5J2Q8NH18 312 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 GORASP2Q9H8Y8 452 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 FKRPQ9H9S5 495 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 SNX13Q9Y5W8 968 aa18.01■□□□□ 0.47
CCS-208ENST00000533244 AKAP9Q99996 3911 aa18■□□□□ 0.47
CCS-208ENST00000533244 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP18■□□□□ 0.47
CCS-208ENST00000533244 OR6C65A6NJZ3 312 aa18■□□□□ 0.47
CCS-208ENST00000533244 OR5H1A6NKK0 313 aa18■□□□□ 0.47
CCS-208ENST00000533244 PLPP3O14495 311 aa18■□□□□ 0.47
CCS-208ENST00000533244 UGT2B15P54855 530 aa18■□□□□ 0.47
CCS-208ENST00000533244 PUDPQ08623 228 aa18■□□□□ 0.47
CCS-208ENST00000533244 SPATS1Q496A3 300 aa18■□□□□ 0.47
CCS-208ENST00000533244 TIMM23BQ5SRD1 257 aa18■□□□□ 0.47
CCS-208ENST00000533244 FBXW10Q5XX13 1052 aa18■□□□□ 0.47
CCS-208ENST00000533244 SLC46A3Q7Z3Q1 461 aa18■□□□□ 0.47
CCS-208ENST00000533244 P2RY8Q86VZ1 359 aa18■□□□□ 0.47
CCS-208ENST00000533244 DEFB107AQ8IZN7 70 aa18■□□□□ 0.47
CCS-208ENST00000533244 OFCC1Q8IZS5 231 aa18■□□□□ 0.47
CCS-208ENST00000533244 FAM156AQ8NDB6 213 aa18■□□□□ 0.47
CCS-208ENST00000533244 TMEM255BQ8WV15 326 aa18■□□□□ 0.47
CCS-208ENST00000533244 PIK3IP1Q96FE7 263 aa18■□□□□ 0.47
CCS-208ENST00000533244 NSL1Q96IY1 281 aa18■□□□□ 0.47
CCS-208ENST00000533244 MUS81Q96NY9 551 aa18■□□□□ 0.47
CCS-208ENST00000533244 HS3ST6Q96QI5 342 aa18■□□□□ 0.47
CCS-208ENST00000533244 CDRT15Q96T59 188 aa18■□□□□ 0.47
CCS-208ENST00000533244 LINC00470Q9BZP3 86 aa18■□□□□ 0.47
CCS-208ENST00000533244 LIME1Q9H400 295 aa18■□□□□ 0.47
CCS-208ENST00000533244 DCAF13Q9NV06 445 aaKnown RBP18■□□□□ 0.47
CCS-208ENST00000533244 UPB1Q9UBR1 384 aa18■□□□□ 0.47
CCS-208ENST00000533244 RPS6KA6Q9UK32 745 aa18■□□□□ 0.47
CCS-208ENST00000533244 KPNA4O00629 521 aaPredicted RBP17.99■□□□□ 0.47
CCS-208ENST00000533244 FFAR1O14842 300 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 PRSS23O95084 383 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 CH25HO95992 272 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 MT-ND1P03886 318 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 ASAH2BP0C7U1 165 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 T-ENOLP0DO92 83 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 NQO1P15559 274 aaKnown RBP17.99■□□□□ 0.47
CCS-208ENST00000533244 DNAJA1P31689 397 aaKnown RBP17.99■□□□□ 0.47
CCS-208ENST00000533244 CLDN17P56750 224 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 ST3GAL3Q11203 375 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 PMS2P3Q13401 168 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 GABRA6Q16445 453 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 NIPAL3Q6P499 406 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 SSX8Q7RTT4 187 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 TSEN54Q7Z6J9 526 aaKnown RBP17.99■□□□□ 0.47
CCS-208ENST00000533244 WFDC8Q8IUA0 241 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 C10orf53Q8N6V4 93 aa17.99■□□□□ 0.47
CCS-208ENST00000533244 C1orf162Q8NEQ5 155 aaPredicted RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms