RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 KIF18BQ86Y91 864 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 EPHX4Q8IUS5 362 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 KDM8Q8N371 416 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 LRRC17Q8N6Y2 441 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 TMEM45BQ96B21 275 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 OXGR1Q96P68 337 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF385AQ96PM9 386 aaKnown RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ASPNQ9BXN1 380 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 KLHL4Q9C0H6 718 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 FKRPQ9H9S5 495 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 NMNAT1Q9HAN9 279 aaPredicted RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 C20orf141Q9NUB4 165 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 MRPL39Q9NYK5 338 aaKnown RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 ELOVL5Q9NYP7 299 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 PRSS50Q9UI38 385 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 MED31Q9Y3C7 131 aa10.62□□□□□ -0.71
SSBP3-214ENST00000533209 FAM32AQ9Y421 112 aaKnown RBP10.62□□□□□ -0.71
SSBP3-214ENST00000533209 A0A087WUU8 490 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 A0A1W2PRQ8 180 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 MRPL33O75394 65 aaKnown RBP10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ASAH2BP0C7U1 165 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 POU2F1P14859 743 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 NQO1P15559 274 aaKnown RBP10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ITGA2P17301 1181 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 PMS2P3Q13401 168 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 DGCR6Q14129 220 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 TBPL2Q6SJ96 375 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 NHLRC1Q6VVB1 395 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 STAC2Q6ZMT1 411 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ZDHHC21Q8IVQ6 265 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF100Q8IYN0 542 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 GABRG1Q8N1C3 465 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 OR5J2Q8NH18 312 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 LIPHQ8WWY8 451 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ACOT11Q8WXI4 607 aaPredicted RBP10.61□□□□□ -0.71
SSBP3-214ENST00000533209 APH1AQ96BI3 265 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 SGTBQ96EQ0 304 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 DHRS1Q96LJ7 313 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 PIP5K1AQ99755 562 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 FUZQ9BT04 418 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ANKRD19PQ9H560 264 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 IL1RAPQ9NPH3 570 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 NANSQ9NR45 359 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 PARPBPQ9NWS1 579 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF229Q9UJW7 825 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 PKDREJQ9NTG1 2253 aa10.61□□□□□ -0.71
SSBP3-214ENST00000533209 DCHS2Q6V1P9 2916 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 C16orf97H3BN30 126 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 HNRNPRO43390 633 aaKnown RBP10.6□□□□□ -0.71
SSBP3-214ENST00000533209 TRAF3IP2O43734 574 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-214ENST00000533209 OR7A10O76100 309 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 FABP3P05413 133 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 H1F0P07305 194 aaKnown RBP10.6□□□□□ -0.71
SSBP3-214ENST00000533209 HLA-DOBP13765 273 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF43P17038 809 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 FUT1P19526 365 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 UGT2B10P36537 528 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 PEX19P40855 299 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 MAGEA2P43356 314 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 RASSF2P50749 326 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 PUDPQ08623 228 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 FBXW9Q5XUX1 488 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 PODNL1Q6PEZ8 512 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 CASP12Q6UXS9 341 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 Q6ZT83 130 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 AAED1Q7RTV5 226 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 PIWIL3Q7Z3Z3 882 aaKnown RBP10.6□□□□□ -0.71
SSBP3-214ENST00000533209 CXorf67Q86X51 503 aaPredicted RBP10.6□□□□□ -0.71
SSBP3-214ENST00000533209 NRMQ8IXM6 262 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF295-AS1Q8N0V1 137 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 LINC01560Q8TB33 94 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 SLC7A13Q8TCU3 470 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 MARVELD3Q96A59 401 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 MCUR1Q96AQ8 359 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 LRGUKQ96M69 825 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 SEPHS2Q99611 448 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 LRMDAQ9H2I8 198 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 FANCFQ9NPI8 374 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 CRIM1Q9NZV1 1036 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 SLC7A8Q9UHI5 535 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 POMPQ9Y244 141 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 TESMINQ9Y4I5 508 aa10.6□□□□□ -0.71
SSBP3-214ENST00000533209 HTR3EA5X5Y0 456 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 TUBAL3A6NHL2 446 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 AQP12BA6NM10 295 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 ZNF432O94892 652 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 CNOT4O95628 575 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 ADAP00813 363 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 IGHV3-9P01782 118 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 TSPAN19P0C672 248 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 ADORA3P0DMS8 318 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 UMPSP11172 480 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 IFI30P13284 250 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 PSMB1P20618 241 aaKnown RBP10.59□□□□□ -0.71
SSBP3-214ENST00000533209 MAKP20794 623 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 KIR2DL3P43628 341 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 SELENOPP49908 381 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 CLDN17P56750 224 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 IL1RL1Q01638 556 aa10.59□□□□□ -0.71
SSBP3-214ENST00000533209 PRKCDQ05655 676 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms