RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 WLSQ5T9L3 541 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 SCAIQ8N9R8 606 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 ZNF570Q96NI8 536 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 TUBA1CQ9BQE3 449 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 NAA11Q9BSU3 229 aaPredicted RBP17.05■□□□□ 0.32
SMPD1-205ENST00000531303 IFT27Q9BW83 186 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 GABARAPL3Q9BY60 117 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 TAS2R5Q9NYW4 299 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 KLHL13Q9P2N7 655 aa17.05■□□□□ 0.32
SMPD1-205ENST00000531303 COL6A6A6NMZ7 2263 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 MS4A18H0YCH9 400 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 UQCRC1P31930 480 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 ESRRGP62508 458 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 RPS4XP62701 263 aaKnown RBP17.04■□□□□ 0.32
SMPD1-205ENST00000531303 GINS1Q14691 196 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 MS4A18Q3C1V0 323 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 ALG10Q5BKT4 473 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 TMEM225Q6GV28 225 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 PAQR6Q6TCH4 344 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 GFRALQ6UXV0 394 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 GPAT4Q86UL3 456 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 DHRSXQ8N5I4 330 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 ZNF555Q8NEP9 628 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 OR52L1Q8NGH7 329 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 PNPLA3Q9NST1 481 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 FAM118AQ9NWS6 357 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 IL20Q9NYY1 176 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 ENOPH1Q9UHY7 261 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 B3GALT5Q9Y2C3 310 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 HIF3AQ9Y2N7 669 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 ALPK2Q86TB3 2170 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 BSNQ9UPA5 3926 aa17.04■□□□□ 0.32
SMPD1-205ENST00000531303 MCIDASD6RGH6 385 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 SMAD9O15198 467 aaKnown RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 EIF1BO60739 113 aaKnown RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 SYNGR4O95473 234 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PLGP00747 810 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 TPOP07202 933 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 AGFG1P52594 562 aaKnown RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 CTXN1P60606 82 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PRPS1P60891 318 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 ERVK-25P63136 954 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PUDPQ08623 228 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PON3Q15166 354 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PTGES3Q15185 160 aaKnown RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 ZNF585AQ6P3V2 769 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 CHERPQ8IWX8 916 aaKnown RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 CLDN22Q8N7P3 220 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 CPNE4Q96A23 557 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 RDH12Q96NR8 316 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 ZNF184Q99676 751 aaPredicted RBP17.03■□□□□ 0.32
SMPD1-205ENST00000531303 SLX1AQ9BQ83 275 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 ADI1Q9BV57 179 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PRRG4Q9BZD6 226 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 PRDM14Q9GZV8 571 aa17.03■□□□□ 0.32
SMPD1-205ENST00000531303 OR14I1A6ND48 311 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 AQP7P3A6NL99 342 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 CLCA1A8K7I4 914 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 H0YJX3 145 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 PPP1R3DO95685 299 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 HLA-DOBP13765 273 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 ABOP16442 354 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 SLC6A6P31641 620 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 P2RY4P51582 365 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 TOP3AQ13472 1001 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-205ENST00000531303 ZNF239Q16600 458 aaKnown RBP17.02■□□□□ 0.32
SMPD1-205ENST00000531303 RPL13AP3Q6NVV1 102 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 PM20D2Q8IYS1 436 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 OR4Q3Q8NH05 313 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 FNDC9Q8TBE3 224 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 CPT1CQ8TCG5 803 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 GRIP2Q9C0E4 1043 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 INIPQ9NRY2 104 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 MCTS1Q9ULC4 181 aaKnown RBP17.02■□□□□ 0.32
SMPD1-205ENST00000531303 IER3IP1Q9Y5U9 82 aa17.02■□□□□ 0.32
SMPD1-205ENST00000531303 RP1L1Q8IWN7 2480 aaPredicted RBP17.02■□□□□ 0.32
SMPD1-205ENST00000531303 BCKDKO14874 412 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 ATXN7O15265 892 aaPredicted RBP17.01■□□□□ 0.31
SMPD1-205ENST00000531303 DNPH1O43598 174 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 CLIC3O95833 236 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 GIPRP48546 466 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 H3F3AP84243 136 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 C1DQ13901 141 aaKnown RBP17.01■□□□□ 0.31
SMPD1-205ENST00000531303 ANKDD1AQ495B1 522 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 SLC35F1Q5T1Q4 408 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 ACSM5Q6NUN0 579 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 SLC27A4Q6P1M0 643 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 FCRLAQ7L513 359 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 LRRC75AQ8NAA5 344 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 TRIB1Q96RU8 372 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 KATNB1Q9BVA0 655 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 POLDIP3Q9BY77 421 aaKnown RBP17.01■□□□□ 0.31
SMPD1-205ENST00000531303 NDEL1Q9GZM8 345 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 ADAM18Q9Y3Q7 739 aa17.01■□□□□ 0.31
SMPD1-205ENST00000531303 IGSF10Q6WRI0 2623 aa17■□□□□ 0.31
SMPD1-205ENST00000531303 LOC100130705A0A1B0GUX0 176 aa17■□□□□ 0.31
SMPD1-205ENST00000531303 ZAR1LA6NP61 321 aa17■□□□□ 0.31
SMPD1-205ENST00000531303 KDM4EB2RXH2 506 aaPredicted RBP17■□□□□ 0.31
SMPD1-205ENST00000531303 FZD7O75084 574 aa17■□□□□ 0.31
SMPD1-205ENST00000531303 TSPAN19P0C672 248 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms