RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 NANSQ9NR45 359 aa13.6□□□□□ -0.23
CCS-206ENST00000530961 ZNF229Q9UJW7 825 aa13.6□□□□□ -0.23
CCS-206ENST00000530961 APCP25054 2843 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 KPNA4O00629 521 aaPredicted RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 RAMP1O60894 148 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 SMNDC1O75940 238 aaKnown RBP eCLIP13.59□□□□□ -0.23
CCS-206ENST00000530961 KRT36O76013 467 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 CH25HO95992 272 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 HIST1H2ABP04908 130 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 RAP2AP10114 183 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 NQO1P15559 274 aaKnown RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 UGT2B15P54855 530 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 TFF3Q07654 80 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 FOXD4Q12950 439 aaPredicted RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 PMS2P3Q13401 168 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 ZNF730Q6ZMV8 503 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 MBOAT2Q6ZWT7 520 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 HIST3H2AQ7L7L0 130 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 YTHDF3Q7Z739 585 aaKnown RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 OR9K2Q8NGE7 335 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 OR5J2Q8NH18 312 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 HIST1H2ACQ93077 130 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 RNASE6Q93091 150 aaKnown RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 SGTBQ96EQ0 304 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 OXGR1Q96P68 337 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 MOGAT1Q96PD6 335 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 FANCFQ9NPI8 374 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 PARPBPQ9NWS1 579 aa13.59□□□□□ -0.23
CCS-206ENST00000530961 NOSIPQ9Y314 301 aaKnown RBP13.59□□□□□ -0.23
CCS-206ENST00000530961 A0A087WUU8 490 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 DHRS12A0PJE2 317 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 NKX2-6A6NCS4 301 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 PRSS44E7EML9 344 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 DIRAS1O95057 198 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 OR6A2O95222 327 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 GADD45GO95257 159 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 ASAH2BP0C7U1 165 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 ZNF43P17038 809 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 FUT1P19526 365 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 PTNP21246 168 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 CBLP22681 906 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 PEX19P40855 299 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 PRKCDQ05655 676 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 GABPB1Q06547 395 aaPredicted RBP13.58□□□□□ -0.24
CCS-206ENST00000530961 BEND4Q6ZU67 534 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 NUFIP2Q7Z417 695 aaKnown RBP13.58□□□□□ -0.24
CCS-206ENST00000530961 LUZP2Q86TE4 346 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 GPAT4Q86UL3 456 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 SPATA24Q86W54 205 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 LSRQ86X29 649 aaPredicted RBP13.58□□□□□ -0.24
CCS-206ENST00000530961 NRMQ8IXM6 262 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 ADGRG5Q8IZF4 528 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 CDK20Q8IZL9 346 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 ZNF610Q8N9Z0 462 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 PFN4Q8NHR9 129 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 SLC7A13Q8TCU3 470 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 TMEM45BQ96B21 275 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 CHID1Q9BWS9 393 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 KRCC1Q9NPI7 259 aaPredicted RBP13.58□□□□□ -0.24
CCS-206ENST00000530961 ELOVL5Q9NYP7 299 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 FLVCR1Q9Y5Y0 555 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 NCKAP5O14513 1909 aa13.58□□□□□ -0.24
CCS-206ENST00000530961 TCRBV3S1A0A5B6 114 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 LRRN3E7EW58 273 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 PLPP3O14495 311 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 MRPL33O75394 65 aaKnown RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 CIB2O75838 187 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 OR7A10O76100 309 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 CNOT4O95628 575 aaKnown RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 FUT4P22083 530 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 OR3A2P47893 321 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 HMGA2P52926 109 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 SPIBQ01892 262 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 PUDPQ08623 228 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 ZP4Q12836 540 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 C1DQ13901 141 aaKnown RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 FGD3Q5JSP0 725 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 C1orf146Q5VVC0 180 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 PODNL1Q6PEZ8 512 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 CREB3L2Q70SY1 520 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 SLC46A3Q7Z3Q1 461 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 PXKQ7Z7A4 578 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 KIF18BQ86Y91 864 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 CANT1Q8WVQ1 401 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 ZNF775Q96BV0 537 aaPredicted RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 BPIFA2Q96DR5 249 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 RBM24Q9BX46 236 aaKnown RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 OPN3Q9H1Y3 402 aaPredicted RBP13.57□□□□□ -0.24
CCS-206ENST00000530961 C12orf49Q9H741 205 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 YY1AP1Q9H869 796 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 C20orf141Q9NUB4 165 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 B3GAT1Q9P2W7 334 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 SEC14L4Q9UDX3 406 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 AURKCQ9UQB9 309 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 TMEM5Q9Y2B1 443 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 TESMINQ9Y4I5 508 aa13.57□□□□□ -0.24
CCS-206ENST00000530961 DNAJC13O75165 2243 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 MS4A18H0YCH9 400 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 IFI30P13284 250 aa13.56□□□□□ -0.24
CCS-206ENST00000530961 RRM2P31350 389 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms