RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 CORINQ9Y5Q5 1042 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 LYVE1Q9Y5Y7 322 aa12.47□□□□□ -0.41
USF1-209ENST00000529476 SH3PXD2BA1X283 911 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 WIPF3A6NGB9 483 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 TNFRSF11BO00300 401 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 TIPRLO75663 272 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 KRT36O76013 467 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 CLDN1O95832 211 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 CST1P01037 141 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 IGF2P01344 180 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 CRHP06850 196 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 YES1P07947 543 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 ASAH2BP0C7U1 165 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 HOXB6P17509 224 aaKnown RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 FUT1P19526 365 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 MAKP20794 623 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 AGTR1P30556 359 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 OPRM1P35372 400 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 GPR4P46093 362 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 LIMS1P48059 325 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 SLC16A1P53985 500 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 CTBP2P56545 445 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 PMS2P3Q13401 168 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 SLC17A1Q14916 467 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 PDK3Q15120 406 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 TMEM225Q6GV28 225 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 VWA1Q6PCB0 445 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 FAM214BQ7L5A3 538 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 RRM2BQ7LG56 351 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 GPAT4Q86UL3 456 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 ZNF808Q8N4W9 903 aaPredicted RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 SCAIQ8N9R8 606 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 RELL2Q8NC24 303 aaPredicted RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 OR4C15Q8NGM1 316 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 OR5J2Q8NH18 312 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 ASB5Q8WWX0 329 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 DUS3LQ96G46 650 aaKnown RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 SFXN3Q9BWM7 321 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 YY1AP1Q9H869 796 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 REEP1Q9H902 201 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 BCO1Q9HAY6 547 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 MRPL39Q9NYK5 338 aaKnown RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 ZNF629Q9UEG4 869 aaPredicted RBP12.46□□□□□ -0.41
USF1-209ENST00000529476 ZNF229Q9UJW7 825 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 TMCC3Q9ULS5 477 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 B3GALT5Q9Y2C3 310 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 U3KQV3 271 aa12.46□□□□□ -0.41
USF1-209ENST00000529476 CRYBG3Q68DQ2 2970 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 IGKV3D-15A0A087WSY6 115 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 FAM90A27PA6NNH2 459 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 ZNF724A8MTY0 619 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 MS4A18H0YCH9 400 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 PLPP3O14495 311 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 DVL2O14641 736 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 IL18BPO95998 194 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HPRP00739 348 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HIST1H2ABP04908 130 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 OMPP47874 163 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HMGA2P52926 109 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 IST1P53990 364 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 LAPTM4AQ15012 233 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 MS4A18Q3C1V0 323 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 TMEM201Q5SNT2 666 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 XKRXQ6PP77 449 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HIST3H2AQ7L7L0 130 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 NUFIP2Q7Z417 695 aaKnown RBP12.45□□□□□ -0.42
USF1-209ENST00000529476 BTLAQ7Z6A9 289 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 ADPRHL1Q8NDY3 354 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 OR9K2Q8NGE7 335 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 LILRB4Q8NHJ6 448 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 CA5BP1Q8WTZ4 195 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 LIPHQ8WWY8 451 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HIST1H2ACQ93077 130 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 STARD4Q96DR4 205 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 FAM46AQ96IP4 442 aaKnown RBP12.45□□□□□ -0.42
USF1-209ENST00000529476 SF3B5Q9BWJ5 86 aaKnown RBP12.45□□□□□ -0.42
USF1-209ENST00000529476 UCK2Q9BZX2 261 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 C12orf49Q9H741 205 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 GP6Q9HCN6 339 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 B3GAT1Q9P2W7 334 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 RASD1Q9Y272 281 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 EMC9Q9Y3B6 208 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 SAMHD1Q9Y3Z3 626 aaKnown RBP12.45□□□□□ -0.42
USF1-209ENST00000529476 AP4S1Q9Y587 144 aa12.45□□□□□ -0.42
USF1-209ENST00000529476 HTR3EA5X5Y0 456 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 EFCAB9A8MZ26 197 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 C11orf98E9PRG8 122 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 GNGT2O14610 69 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 OR10H3O60404 316 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 VAMP5O95183 116 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 ADORA3P0DMS8 318 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 SAGP10523 405 aaPredicted RBP12.44□□□□□ -0.42
USF1-209ENST00000529476 AGAP20933 346 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 NTF4P34130 210 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 IL1RL1Q01638 556 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 TMPRSS11FQ6ZWK6 438 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 NANOGNBQ7Z5D8 188 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 CDK20Q8IZL9 346 aa12.44□□□□□ -0.42
USF1-209ENST00000529476 ZIC4Q8N9L1 334 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms