RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 MPP4Q96JB8 637 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PSMG3-AS1Q96PY0 264 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ALPK1Q96QP1 1244 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TNFRSF13CQ96RJ3 184 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 EPYCQ99645 322 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM43Q9BTV4 400 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF426Q9BUY5 554 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SFXN3Q9BWM7 321 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 C1QTNF6Q9BXI9 259 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 ASPNQ9BXN1 380 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TRIM15Q9C019 465 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SEMA6AQ9H2E6 1030 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PCNX3Q9H6A9 2034 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 C12orf10Q9HB07 376 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 IL1RAPQ9NPH3 570 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 NANSQ9NR45 359 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC7A10Q9NS82 523 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PAQR5Q9NXK6 330 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TAS2R5Q9NYW4 299 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 KLHL9Q9P2J3 617 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 B3GAT1Q9P2W7 334 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 PROCRQ9UNN8 238 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 TRAPPC4Q9Y296 219 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 NOSIPQ9Y314 301 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 EMC9Q9Y3B6 208 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MED31Q9Y3C7 131 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 SAMHD1Q9Y3Z3 626 aaKnown RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MAGED1Q9Y5V3 778 aaPredicted RBP4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 FLVCR1Q9Y5Y0 555 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 RELNP78509 3460 aa4.08□□□□□ -1.76
CHMP4A-202ENST00000524955 MED12Q93074 2177 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TENM4Q6N022 2769 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TCRBV3S1A0A5B6 114 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SH3PXD2BA1X283 911 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC35F4A4IF30 521 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 AQP12BA6NM10 295 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 CYSRT1A8MQ03 144 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 A8MXE2 369 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MCIDASD6RGH6 385 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 H7C1C5 153 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 M0R3G1 203 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TRAF3IP2O43734 574 aaPredicted RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR10H3O60404 316 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 EIF1BO60739 113 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MRPL33O75394 65 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 UPK3AO75631 287 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RAD51DO75771 328 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 KRT33AO76009 404 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR6A2O95222 327 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SOX14O95416 240 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 GASTP01350 101 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 HIST1H2ABP04908 130 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ASAH2BP0C7U1 165 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RAP2AP10114 183 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 IFNGR1P15260 489 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF43P17038 809 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ITGA2P17301 1181 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 DNAJA1P31689 397 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 CCKARP32238 428 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 IFNA8P32881 189 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RBM34P42696 430 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OMPP47874 163 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR3A2P47893 321 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC9A3P48764 834 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ASCL1P50553 236 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 BIDP55957 195 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 LCN6P62502 163 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ERVK-25P63136 954 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TUBA1BP68363 451 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TUBA4AP68366 448 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 PRKCDQ05655 676 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 RUNX1T1Q06455 604 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 PUDPQ08623 228 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 FHL1Q13642 323 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 POU4F3Q15319 338 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 STK11Q15831 433 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZSCAN26Q16670 478 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SPATS1Q496A3 300 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SWT1Q5T5J6 900 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 GTF2IRD2BQ6EKJ0 949 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OR2T5Q6IEZ7 315 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 HMBOX1Q6NT76 420 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MTFR2Q6P444 385 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 KLHL17Q6TDP4 642 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TFAP2EQ6VUC0 442 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 THSD4Q6ZMP0 1018 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MEX3BQ6ZN04 569 aaKnown RBP4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 MBOAT2Q6ZWT7 520 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 TUBA1AQ71U36 451 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC35D2Q76EJ3 337 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 HIST3H2AQ7L7L0 130 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 LINGO2Q7L985 606 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 NANOGNBQ7Z5D8 188 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 ZER1Q7Z7L7 766 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 GALNT5Q7Z7M9 940 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 OAFQ86UD1 273 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 GTF2IRD2Q86UP8 949 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 UEVLDQ8IX04 471 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 AQP12AQ8IXF9 295 aa4.07□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC43A2Q8N370 569 aa4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms