RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 OPN1MW3P0DN78 364 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 POU2F1P14859 743 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ANPEPP15144 967 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF708P17019 499 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF17P17021 662 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TMEM11P17152 192 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TBXA2RP21731 343 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HIST1H1TP22492 207 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 PRKACGP22612 351 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RPS3P23396 243 aaKnown RBP eCLIP1.25□□□□□ -2.21
CD44-212ENST00000524922 PRTN3P24158 256 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PTAFRP25105 342 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PSMA4P25789 261 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 GJB2P29033 226 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CMPK1P30085 196 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PEBP1P30086 187 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 PPP2R1BP30154 601 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SRD5A2P31213 254 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SLC6A6P31641 620 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MAGEA8P43361 318 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TNNT3P45378 269 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 XCR1P46094 333 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 EVX1P49640 407 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PPOXP50336 477 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CSE1LP55060 971 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 TMEM50BP56557 158 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HERV-K104P61576 105 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SNRPEP62304 92 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 UBA52P62987 128 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 IGLV3-21P80748 117 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 XIAPP98170 497 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 GUCY2DQ02846 1103 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ACVR1Q04771 509 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CHRNB3Q05901 458 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PRDX1Q06830 199 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 CD300CQ08708 224 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PIGHQ14442 188 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 GRB7Q14451 532 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 KRT33BQ14525 404 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ABRAXAS2Q15018 415 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 EFTUD2Q15029 972 aaKnown RBP eCLIP1.25□□□□□ -2.21
CD44-212ENST00000524922 TAF1AQ15573 450 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 NTRK2Q16620 822 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 EXOC3L4Q17RC7 722 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HKDC1Q2TB90 917 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PGGHGQ32M88 737 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF791Q3KP31 576 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 HIGD2BQ4VC39 106 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SFT2D3Q587I9 215 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PIGGQ5H8A4 983 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 C1orf189Q5VU69 101 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CCDC70Q6NSX1 233 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NEPROQ6NW34 567 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TTC23LQ6PF05 361 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TMEM220Q6QAJ8 160 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 HSDL2Q6YN16 418 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FRRS1Q6ZNA5 592 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CYP4V2Q6ZWL3 525 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 PXKQ7Z7A4 578 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 LUZP2Q86TE4 346 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NT5DC3Q86UY8 548 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF595Q8IYB9 648 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ABHD12Q8N2K0 398 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RPRMLQ8N4K4 120 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TTC30BQ8N4P2 665 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TBC1D19Q8N5T2 526 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CCDC185Q8N715 623 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 CSNK1A1LQ8N752 337 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NECAB1Q8N987 351 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 LINC01555Q8NAE3 123 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 BBOF1Q8ND07 529 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PPFIBP2Q8ND30 876 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NPEPL1Q8NDH3 523 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 OR2A1Q8NGT9 310 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 OR2AJ1Q8NGZ0 328 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SLC22A8Q8TCC7 542 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 NT5CQ8TCD5 201 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 TSEN15Q8WW01 171 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 RXFP2Q8WXD0 754 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SMPDL3AQ92484 453 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RIT1Q92963 219 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 POP5Q969H6 163 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 RERGQ96A58 199 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 MOAP1Q96BY2 351 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 DHX58Q96C10 678 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 C8orf44Q96CB5 159 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 STARD4Q96DR4 205 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 MTERF3Q96E29 417 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SPACA9Q96E40 222 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 DCUN1D1Q96GG9 259 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PAGE5Q96GU1 130 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RBM41Q96IZ5 413 aaKnown RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF597Q96LX8 424 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 SPATA13Q96N96 652 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 FOPNLQ96NB1 174 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 ZNF830Q96NB3 372 aaPredicted RBP1.25□□□□□ -2.21
CD44-212ENST00000524922 WFIKKN1Q96NZ8 548 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 OLFM3Q96PB7 478 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 PANX3Q96QZ0 392 aa1.25□□□□□ -2.21
CD44-212ENST00000524922 RASL10BQ96S79 203 aa1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms