RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 LHFPL3Q86UP9 236 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 GPALPP1Q8IXQ4 340 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 PSD4Q8NDX1 1056 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 OR52E2Q8NGJ4 325 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 OR4K13Q8NH42 304 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 SECISBP2Q96T21 854 aaKnown RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 JAM3Q9BX67 310 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 SH2D2AQ9NP31 389 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 CHCHD3Q9NX63 227 aaKnown RBP13.09□□□□□ -0.31
CLN8-204ENST00000519254 TAS2R10Q9NYW0 307 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 TNFRSF10DQ9UBN6 386 aa13.09□□□□□ -0.31
CLN8-204ENST00000519254 TMED7-TICAM2A0A0A6YYA0 188 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 TMEM72A0PK05 275 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ANKUB1A6NFN9 424 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 BLOC1S5-TXNDC5H3BN57 136 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 RRP8O43159 456 aaKnown RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 CLPXO76031 633 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 IFNGP01579 166 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 BGLAPP02818 100 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 TSPAN19P0C672 248 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 UQCRC1P31930 480 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 RPS5P46782 204 aaKnown RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 CLK1P49759 484 aaKnown RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 SOX8P57073 446 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 GPR85P60893 370 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ERVK-25P63136 954 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 DYNC1I2Q13409 638 aaKnown RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 C1DQ13901 141 aaKnown RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 OR1C1Q15619 314 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 KLHL12Q53G59 568 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 GRINAQ7Z429 371 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ZBTB46Q86UZ6 589 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ZNF227Q86WZ6 799 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 FDCSPQ8NFU4 85 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 OR51G2Q8NGK0 314 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 TM9SF4Q92544 642 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 SIGLEC12Q96PQ1 595 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 DDOQ99489 341 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 CHCHD6Q9BRQ6 235 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 CENPOQ9BU64 300 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ANGPTL4Q9BY76 406 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 OR51V1Q9H2C8 321 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 RNF167Q9H6Y7 350 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ZNF552Q9H707 407 aaPredicted RBP13.08□□□□□ -0.32
CLN8-204ENST00000519254 SACM1LQ9NTJ5 587 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ERVK13-1Q9NX77 482 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 KLHL21Q9UJP4 597 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 TMED7Q9Y3B3 224 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 KCNMB2Q9Y691 235 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 PMF1-BGLAPU3KQ54 211 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 ALPK2Q86TB3 2170 aa13.08□□□□□ -0.32
CLN8-204ENST00000519254 TRAV36DV7A0A075B6V5 113 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 A0A0G2JMM0 328 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 LOC100506127A0A0U1RQW1 187 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 A0A1W2PPB8 328 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 A0A1W2PRS3 328 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 SLC22A31A6NKX4 558 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 KIR3DP1A8MWS1 328 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 IDH3BO43837 385 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 SUSD5O60279 629 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 NPIPB7O75200 414 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 GPX5O75715 221 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 TCEA1P23193 301 aaKnown RBP13.07□□□□□ -0.32
CLN8-204ENST00000519254 UGT2B10P36537 528 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ATP6V1E1P36543 226 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 DNASE1L1P49184 302 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.07□□□□□ -0.32
CLN8-204ENST00000519254 SNTA1Q13424 505 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 TMED1Q13445 227 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ARMC4Q5T2S8 1044 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 NPEPL1Q8NDH3 523 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 SDR9C7Q8NEX9 313 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 OR4K17Q8NGC6 315 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 GATAD2BQ8WXI9 593 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 NPAS1Q99742 590 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 KATNB1Q9BVA0 655 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 PTDSS2Q9BVG9 487 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 DCSTAMPQ9H295 470 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 FKRPQ9H9S5 495 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 CPNE5Q9HCH3 593 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 KLHL1Q9NR64 748 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 NDUFB11Q9NX14 153 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 DKK4Q9UBT3 224 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ZNF229Q9UJW7 825 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 FBXL2Q9UKC9 423 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 VDAC3Q9Y277 283 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 RAXQ9Y2V3 346 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 SLC25A12O75746 678 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 GYPBP06028 91 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 INHBBP09529 407 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 CPEP16870 476 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 PAICSP22234 425 aaKnown RBP13.07□□□□□ -0.32
CLN8-204ENST00000519254 SUMO3P55854 103 aaPredicted RBP13.07□□□□□ -0.32
CLN8-204ENST00000519254 RPS3AP61247 264 aaKnown RBP13.07□□□□□ -0.32
CLN8-204ENST00000519254 MFAP5Q13361 173 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ANKDD1AQ495B1 522 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 ARSKQ6UWY0 536 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 PHC2Q8IXK0 858 aa13.07□□□□□ -0.32
CLN8-204ENST00000519254 TMEM99Q8N816 258 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms