RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 KPNA4O00629 521 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 TRAF3IP2O43734 574 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 CHP2O43745 196 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF432O94892 652 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 CNOT4O95628 575 aaKnown RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 NCK1P16333 377 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 CDH2P19022 906 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 LSM11P83369 360 aaKnown RBP eCLIP11.69□□□□□ -0.542e-28■■□□□ 11.6
VEGFA-219ENST00000518824 BSPH1Q075Z2 132 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SPOCK1Q08629 439 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 PIN1Q13526 163 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 PPA1Q15181 289 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 ACKR1Q16570 336 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 DEFB113Q30KQ7 82 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 PHYHD1Q5SRE7 291 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 DEF8Q6ZN54 512 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 PIGWQ7Z7B1 504 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 VTCN1Q7Z7D3 282 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 KRTAP1-3Q8IUG1 177 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 NKAIN4Q8IVV8 208 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 RBM15BQ8NDT2 890 aaKnown RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 HSD17B8Q92506 261 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF837Q96EG3 531 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SLC41A3Q96GZ6 507 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 TXNDC15Q96J42 360 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 MUS81Q96NY9 551 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 OXGR1Q96P68 337 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 ALKBH3Q96Q83 286 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 FOXC2Q99958 501 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 TMEM43Q9BTV4 400 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 EMC6Q9BV81 110 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 CXXC4Q9H2H0 198 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SLCO5A1Q9H2Y9 848 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 EFCAB1Q9HAE3 211 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 MEPEQ9NQ76 525 aaPredicted RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 ARL8BQ9NVJ2 186 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 TAS2R16Q9NYV7 291 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SELENONQ9NZV5 590 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 UPB1Q9UBR1 384 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SNX13Q9Y5W8 968 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 SLC25A15Q9Y619 301 aa11.69□□□□□ -0.54
VEGFA-219ENST00000518824 TEP1Q99973 2627 aaKnown RBP11.69□□□□□ -0.54
VEGFA-219ENST00000518824 DYNC1I1O14576 645 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 OR2T1O43869 369 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 GTF2E2P29084 291 aaKnown RBP11.68□□□□□ -0.54
VEGFA-219ENST00000518824 YAP1P46937 504 aaKnown RBP11.68□□□□□ -0.54
VEGFA-219ENST00000518824 UGT2B15P54855 530 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 PSME3P61289 254 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 HIKESHIQ53FT3 197 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 TIMM23BQ5SRD1 257 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 HACD2Q6Y1H2 254 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 SPNS3Q6ZMD2 512 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 H1FNTQ75WM6 255 aaPredicted RBP11.68□□□□□ -0.54
VEGFA-219ENST00000518824 C10orf53Q8N6V4 93 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 RNF148Q8N7C7 305 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 KBTBD8Q8NFY9 601 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 PFN4Q8NHR9 129 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 IGFBPL1Q8WX77 278 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 AKAP1Q92667 903 aaKnown RBP eCLIP11.68□□□□□ -0.54
VEGFA-219ENST00000518824 PROX1Q92786 737 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 MBD6Q96DN6 1003 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 TPD52L3Q96J77 140 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF426Q9BUY5 554 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 AMBRA1Q9C0C7 1298 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 NSRP1Q9H0G5 558 aaKnown RBP11.68□□□□□ -0.54
VEGFA-219ENST00000518824 EVA1AQ9H8M9 152 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 PARPBPQ9NWS1 579 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 MED13LQ71F56 2210 aa11.68□□□□□ -0.54
VEGFA-219ENST00000518824 J3KTA2 159 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 CXCR6O00574 342 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 PLPP3O14495 311 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 CLOCKO15516 846 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 PIP5K1CO60331 668 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 VAMP5O95183 116 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 CH25HO95992 272 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF43P17038 809 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 MPGP29372 298 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF83P51522 516 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TUBA1BP68363 451 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TUBA4AP68366 448 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 IL1RL1Q01638 556 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ZNF74Q16587 644 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 SWT1Q5T5J6 900 aaKnown RBP11.67□□□□□ -0.54
VEGFA-219ENST00000518824 CARD17Q5XLA6 110 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ADAM5Q6NVV9 412 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 C5orf46Q6UWT4 87 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TUBA1AQ71U36 451 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 SLC46A3Q7Z3Q1 461 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TSEN54Q7Z6J9 526 aaKnown RBP11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TMEM123Q8N131 208 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 FAM156AQ8NDB6 213 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 OR6S1Q8NH40 331 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 TMEM255BQ8WV15 326 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 HOPXQ9BPY8 73 aaPredicted RBP11.67□□□□□ -0.54
VEGFA-219ENST00000518824 NELFAQ9H3P2 528 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ALG2Q9H553 416 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 SLC17A5Q9NRA2 495 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 MED29Q9NX70 200 aa11.67□□□□□ -0.54
VEGFA-219ENST00000518824 MRPL39Q9NYK5 338 aaKnown RBP11.67□□□□□ -0.54
VEGFA-219ENST00000518824 ABCD2Q9UBJ2 740 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms