RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 ERVV-1B6SEH8 477 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CHADO15335 359 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 MAGEB4O15481 346 aaPredicted RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CLDN3O15551 220 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 TRIM16O95361 564 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 F10P00742 488 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 IGF1P05019 195 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CYP2B6P20813 491 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CYP2F1P24903 491 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CD80P33681 288 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 APOC4P55056 127 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CSNK1G2P78368 415 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 NUCB2P80303 420 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CSTF1Q05048 431 aaKnown RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 DAZ2Q13117 558 aaKnown RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 PPIL2Q13356 520 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ARL6IP1Q15041 203 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 NSDHLQ15738 373 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 SLC5A12Q1EHB4 618 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF630Q2M218 657 aaPredicted RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 FAM199XQ6PEV8 388 aaPredicted RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CBLN3Q6UW01 205 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ISLR2Q6UXK2 745 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 RNF165Q6ZSG1 346 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 FAM220AQ7Z4H9 259 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 LINC01561Q8N1V8 128 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 TMEM105Q8N8V8 129 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 C20orf203Q8NBC4 194 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 NEIL3Q8TAT5 605 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 FBXO30Q8TB52 745 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 CCDC110Q8TBZ0 833 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 UCN3Q969E3 161 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 MRPL13Q9BYD1 178 aaKnown RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 RWDD1Q9H446 243 aaPredicted RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 DAZ3Q9NR90 486 aaKnown RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 B3GNT2Q9NY97 397 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ACTR3BQ9P1U1 418 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 WARS2Q9UGM6 360 aaKnown RBP2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ANGPTL2Q9UKU9 493 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 ALG6Q9Y672 507 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 U3KQV3 271 aa2.33□□□□□ -2.04
LINC01088-211ENST00000515597 FAM208BQ5VWN6 2430 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 WDR87Q6ZQQ6 2873 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 SMG1Q96Q15 3661 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 ESYT2A0FGR8 921 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 A8MUA0 341 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 MSH4O15457 936 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 UFL1O94874 794 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 KLF8O95600 359 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 GNA14O95837 355 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 IGHV4-34P06331 123 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 PGCP20142 388 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 HTR2AP28223 471 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 PRDX3P30048 256 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 DLSTP36957 453 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 TIGITQ495A1 244 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 TMEM41BQ5BJD5 291 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 ASPHD2Q6ICH7 369 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 CCDC137Q6PK04 289 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 ERO1BQ86YB8 467 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 CENPLQ8N0S6 344 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 ZNF740Q8NDX6 193 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 MRPS31Q92665 395 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 TBX15Q96SF7 602 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 MBOAT4Q96T53 435 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 SMYD3Q9H7B4 428 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 TDRD3Q9H7E2 651 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 UBE2ZQ9H832 354 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 PLGRKTQ9HBL7 147 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 MMP26Q9NRE1 261 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 NUDT15Q9NV35 164 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 PRPF19Q9UMS4 504 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 KIF3AQ9Y496 699 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 KIF20BQ96Q89 1820 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 EP300Q09472 2414 aaPredicted RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 CEP250Q9BV73 2442 aa2.32□□□□□ -2.04
LINC01088-211ENST00000515597 TEP1Q99973 2627 aaKnown RBP2.32□□□□□ -2.04
LINC01088-211ENST00000515597 PHIPQ8WWQ0 1821 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 PTPRSQ13332 1948 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 NBEAQ8NFP9 2946 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 IGHV2-70DA0A0C4DH43 119 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 A0A1W2PNV4 684 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 CTAGE5O15320 804 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 LANCL1O43813 399 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 PRKYO43930 277 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 B3GAT3O94766 335 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 MFN2O95140 757 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 INSP01308 110 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 TBXA2RP21731 343 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 COX7A1P24310 79 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 ANXA13P27216 316 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 YWHABP31946 246 aaKnown RBP2.31□□□□□ -2.04
LINC01088-211ENST00000515597 PRKXP51817 358 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 LINC00315P59091 139 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 LRRC63Q05C16 580 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 RABGAP1LQ5R372 815 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 CYB5R2Q6BCY4 276 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 ATL3Q6DD88 541 aa2.31□□□□□ -2.04
LINC01088-211ENST00000515597 TMCO2Q7Z6W1 182 aaPredicted RBP2.31□□□□□ -2.04
LINC01088-211ENST00000515597 TPRA1Q86W33 373 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms