RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 MRPS15P82914 257 aaKnown RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 MADCAM1Q13477 382 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 KCNAB1Q14722 419 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 EBPQ15125 230 aaKnown RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 SLC25A35Q3KQZ1 300 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 ZNF684Q5T5D7 378 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 CBLN3Q6UW01 205 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 UBE2J2Q8N2K1 259 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 ZNF321PQ8N8H1 164 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 LSM14AQ8ND56 463 aaKnown RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 OR1L3Q8NH93 324 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TSLPQ969D9 159 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TRIM63Q969Q1 353 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 SLC41A2Q96JW4 573 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 MOGAT1Q96PD6 335 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 C7orf50Q9BRJ6 194 aaKnown RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 TRAF4Q9BUZ4 470 aaPredicted RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 NUDT9Q9BW91 350 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TP63Q9H3D4 680 aaPredicted RBP13.53□□□□□ -0.24
NUP54-217ENST00000514987 ACOXLQ9NUZ1 547 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 SPATA2Q9UM82 520 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 COPS3Q9UNS2 423 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 CAMK2AQ9UQM7 478 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 ALG5Q9Y673 324 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TMEM14AQ9Y6G1 99 aa13.53□□□□□ -0.24
NUP54-217ENST00000514987 TRAV36DV7A0A075B6V5 113 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.52□□□□□ -0.25
NUP54-217ENST00000514987 A0A1B0GX78 115 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 A8MUA0 341 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 ALG1L2C9J202 215 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 INMT-MINDY4F8WBC2 141 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 NDUFB5O43674 189 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 ITGA10O75578 1167 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 ZNF432O94892 652 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 CENPAP49450 140 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 EGR4Q05215 589 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 RPL18Q07020 188 aaKnown RBP13.52□□□□□ -0.25
NUP54-217ENST00000514987 GPR176Q14439 515 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 SMAD2Q15796 467 aaKnown RBP13.52□□□□□ -0.25
NUP54-217ENST00000514987 CEP78Q5JTW2 689 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 IL20RBQ6UXL0 311 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 APOOLQ6UXV4 268 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 LIX1LQ8IVB5 337 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 SPEM1Q8N4L4 309 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 OR1N1Q8NGS0 311 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 DNASE2BQ8WZ79 361 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 GAL3ST4Q96RP7 486 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 LPAR4Q99677 370 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 SLITRK2Q9H156 845 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 UCKL1Q9NWZ5 548 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 ING3Q9NXR8 418 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 COPZ2Q9P299 210 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 CACNG2Q9Y698 323 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 HEATR5AQ86XA9 2040 aa13.52□□□□□ -0.25
NUP54-217ENST00000514987 A0A0B4J293 547 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 HCRTR2O43614 444 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 GSTZ1O43708 216 aaPredicted RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 SDC3O75056 442 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 ICOSLGO75144 302 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 GP1BBP13224 206 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 SRMP19623 302 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 HOXD12P35452 270 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 AFF3P51826 1226 aaKnown RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 ZNF117Q03924 483 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 PLCXD2Q0VAA5 305 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 NSDHLQ15738 373 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 GXYLT1Q4G148 440 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 UBE2NLQ5JXB2 153 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 WDR45BQ5MNZ6 344 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 WDR74Q6RFH5 385 aaPredicted RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 C5orf46Q6UWT4 87 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 NOXA1Q86UR1 476 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 PLPP5Q8NEB5 264 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 OR13C5Q8NGS8 318 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 ZNRF4Q8WWF5 429 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 THRSPQ92748 146 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 RNF31Q96EP0 1072 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 ADAD1Q96M93 576 aaKnown RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 KLHL15Q96M94 604 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 OR14A2Q96R54 314 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 TBL1XR1Q9BZK7 514 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 WWTR1Q9GZV5 400 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 ABCG5Q9H222 651 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 BRD7Q9NPI1 651 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 AKAP7Q9P0M2 348 aaPredicted RBP13.51□□□□□ -0.25
NUP54-217ENST00000514987 WNT16Q9UBV4 365 aa13.51□□□□□ -0.25
NUP54-217ENST00000514987 TOX3O15405 576 aaPredicted RBP13.5□□□□□ -0.25
NUP54-217ENST00000514987 SLC25A12O75746 678 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 DHFRP00374 187 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 ATF1P18846 271 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 S100A1P23297 94 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 MST1P26927 711 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 ERP29P30040 261 aaKnown RBP13.5□□□□□ -0.25
NUP54-217ENST00000514987 CSNK1EP49674 416 aaKnown RBP13.5□□□□□ -0.25
NUP54-217ENST00000514987 NR0B1P51843 470 aaKnown RBP13.5□□□□□ -0.25
NUP54-217ENST00000514987 BLVRAP53004 296 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 IFITM2Q01629 132 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 LTBQ06643 244 aa13.5□□□□□ -0.25
NUP54-217ENST00000514987 EGR3Q06889 387 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms