RNA–Protein interactions for RNA: ENST00000511355.5

NME1-209, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 5 BASIC

Gene NME1, Length 1,645 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-209ENST00000511355 ZNF501Q96CX3 271 aaPredicted RBP12.83□□□□□ -0.36
NME1-209ENST00000511355 RBM18Q96H35 190 aaKnown RBP12.83□□□□□ -0.36
NME1-209ENST00000511355 PGLYRP3Q96LB9 341 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 ZNF578Q96N58 590 aaPredicted RBP12.83□□□□□ -0.36
NME1-209ENST00000511355 LMF2Q9BU23 707 aaKnown RBP12.83□□□□□ -0.36
NME1-209ENST00000511355 SLC19A3Q9BZV2 496 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 MED28Q9H204 178 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 TEKT2Q9UIF3 430 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 SPATA2Q9UM82 520 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 LHX6Q9UPM6 363 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 CLCA3PQ9Y6N3 262 aa12.83□□□□□ -0.36
NME1-209ENST00000511355 USP24Q9UPU5 2620 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 A0A0G2JMP0 313 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 A0A0X1KG70 313 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 ARPC3O15145 178 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 PRAF2O60831 178 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 CTSBP07858 339 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 UCHL1P09936 223 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 SLC35E2P0CK97 266 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 STOMP27105 288 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 SHC1P29353 583 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 GPR143P51810 404 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 INSM1Q01101 510 aaPredicted RBP12.82□□□□□ -0.36
NME1-209ENST00000511355 GALK2Q01415 458 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 BIKQ13323 160 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 CDONQ4KMG0 1287 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 DEFB134Q4QY38 66 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 ACSM3Q53FZ2 586 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 FAM69AQ5T7M9 428 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 YOD1Q5VVQ6 348 aaPredicted RBP12.82□□□□□ -0.36
NME1-209ENST00000511355 KCTD20Q7Z5Y7 419 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 FGD2Q7Z6J4 655 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 BPHLQ86WA6 291 aaPredicted RBP12.82□□□□□ -0.36
NME1-209ENST00000511355 ZNF440Q8IYI8 595 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 TMEM99Q8N816 258 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 OR4M2Q8NGB6 313 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 OR4M1Q8NGD0 313 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 ADAMTS18Q8TE60 1221 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 HGDQ93099 445 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 COL26A1Q96A83 441 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 SMIM19Q96E16 107 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 GHITMQ9H3K2 345 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 PLEKHA1Q9HB21 404 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 STARD5Q9NSY2 213 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 ICAM5Q9UMF0 924 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 RASD1Q9Y272 281 aa12.82□□□□□ -0.36
NME1-209ENST00000511355 A0A1W2PS29 197 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 GXYLT2A0PJZ3 443 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 EFCAB7A8K855 629 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 A8MV72 311 aaPredicted RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 CYR61O00622 381 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 GALR3O60755 368 aaPredicted RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 NDUFB2O95178 105 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ECDO95905 644 aaPredicted RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 PRG2P13727 222 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 SCAND1P57086 179 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 AP3S2P59780 193 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ZNF85Q03923 595 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ZNHIT3Q15649 155 aaPredicted RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 ZNF141Q15928 474 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 NTRK2Q16620 822 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 CCDC157Q569K6 752 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 CDCP2Q5VXM1 449 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ULK3Q6PHR2 472 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ARL9Q6T311 187 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 NUP54Q7Z3B4 507 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 NANOGNBQ7Z5D8 188 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 SAMD12Q8N8I0 201 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 OR1L3Q8NH93 324 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 TRMT10AQ8TBZ6 339 aaKnown RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 RPS4Y2Q8TD47 263 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 MVB12AQ96EY5 273 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 MCUBQ9NWR8 336 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 MAT2BQ9NZL9 334 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 ST6GALNAC2Q9UJ37 374 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 MRPS2Q9Y399 296 aaKnown RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 SIRT4Q9Y6E7 314 aaPredicted RBP12.81□□□□□ -0.36
NME1-209ENST00000511355 PTPRBP23467 1997 aa12.81□□□□□ -0.36
NME1-209ENST00000511355 TRABD2BA6NFA1 517 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 ZNF879B4DU55 563 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 LRRN3E7EW58 273 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 NCR1O76036 304 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 ANXA3P12429 323 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 NT5EP21589 574 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 MNDAP41218 407 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 RAB38P57729 211 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 MGAT2Q10469 447 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 IL11RAQ14626 422 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 CDK5R1Q15078 307 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 SPEGQ15772 3267 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 KLHL12Q53G59 568 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 TRMT12Q53H54 448 aaKnown RBP12.8□□□□□ -0.36
NME1-209ENST00000511355 Q5BKY6 102 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 DHRS13Q6UX07 377 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 WDR88Q6ZMY6 472 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 DPY19L2P2Q6ZN68 376 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 BTN2A1Q7KYR7 527 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 HMGN2P46Q86SG4 172 aa12.8□□□□□ -0.36
NME1-209ENST00000511355 LUZP2Q86TE4 346 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms